Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.61■■□□□ 1.05
PMS1P54277 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.61■■□□□ 1.05
PMS1P54277 AL390719.1-204ENST00000412397 1219 ntBASIC21.61■■□□□ 1.05
PMS1P54277 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PMS1P54277 MIR4758-201ENST00000577688 71 ntBASIC21.61■■□□□ 1.05
PMS1P54277 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
PMS1P54277 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PMS1P54277 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PMS1P54277 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS1P54277 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS1P54277 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS1P54277 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PMS1P54277 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
PMS1P54277 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.6■■□□□ 1.05
PMS1P54277 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.6■■□□□ 1.05
PMS1P54277 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS1P54277 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PMS1P54277 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
PMS1P54277 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PMS1P54277 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PMS1P54277 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 BX323043.1-201ENST00000641006 1765 ntBASIC21.59■■□□□ 1.05
PMS1P54277 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.59■■□□□ 1.05
PMS1P54277 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.59■■□□□ 1.05
PMS1P54277 RPS2P52-201ENST00000469610 820 ntBASIC21.59■■□□□ 1.05
PMS1P54277 AC097658.1-201ENST00000475555 843 ntBASIC21.59■■□□□ 1.05
PMS1P54277 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.59■■□□□ 1.05
PMS1P54277 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.59■■□□□ 1.05
PMS1P54277 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.59■■□□□ 1.05
PMS1P54277 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.59■■□□□ 1.05
PMS1P54277 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PMS1P54277 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.59■■□□□ 1.05
PMS1P54277 AC092368.3-202ENST00000574180 1591 ntBASIC21.58■■□□□ 1.05
PMS1P54277 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
PMS1P54277 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PMS1P54277 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC21.58■■□□□ 1.05
PMS1P54277 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.58■■□□□ 1.05
PMS1P54277 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.58■■□□□ 1.05
PMS1P54277 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.58■■□□□ 1.05
PMS1P54277 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.58■■□□□ 1.05
PMS1P54277 AL109923.1-201ENST00000618799 583 ntBASIC21.58■■□□□ 1.05
PMS1P54277 HLA-B-256ENST00000639848 1089 ntBASIC21.58■■□□□ 1.05
PMS1P54277 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS1P54277 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS1P54277 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.58■■□□□ 1.04
PMS1P54277 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS1P54277 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS1P54277 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS1P54277 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PMS1P54277 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.04
PMS1P54277 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 AL020996.1-203ENST00000536896 2307 ntBASIC21.57■■□□□ 1.04
PMS1P54277 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
PMS1P54277 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PMS1P54277 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 AC090192.1-201ENST00000517740 490 ntBASIC21.57■■□□□ 1.04
PMS1P54277 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.57■■□□□ 1.04
PMS1P54277 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.57■■□□□ 1.04
PMS1P54277 AC104771.1-201ENST00000603335 964 ntBASIC21.57■■□□□ 1.04
PMS1P54277 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.57■■□□□ 1.04
PMS1P54277 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.57■■□□□ 1.04
PMS1P54277 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.57■■□□□ 1.04
PMS1P54277 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.57■■□□□ 1.04
PMS1P54277 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PMS1P54277 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.57■■□□□ 1.04
PMS1P54277 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 RNF165-205ENST00000588679 2904 ntBASIC21.56■■□□□ 1.04
PMS1P54277 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PMS1P54277 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms