Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
ATXN1P54253 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ATXN1P54253 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.62■□□□□ 0.89
ATXN1P54253 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN1P54253 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN1P54253 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.62■□□□□ 0.89
ATXN1P54253 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.62■□□□□ 0.89
ATXN1P54253 RN7SL850P-201ENST00000579959 291 ntBASIC20.62■□□□□ 0.89
ATXN1P54253 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.62■□□□□ 0.89
ATXN1P54253 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.62■□□□□ 0.89
ATXN1P54253 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.62■□□□□ 0.89
ATXN1P54253 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATXN1P54253 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ATXN1P54253 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN1P54253 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN1P54253 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.61■□□□□ 0.89
ATXN1P54253 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN1P54253 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.61■□□□□ 0.89
ATXN1P54253 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.61■□□□□ 0.89
ATXN1P54253 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN1P54253 AL590326.2-201ENST00000625139 305 ntBASIC20.61■□□□□ 0.89
ATXN1P54253 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN1P54253 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.61■□□□□ 0.89
ATXN1P54253 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.61■□□□□ 0.89
ATXN1P54253 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATXN1P54253 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 AC116351.2-201ENST00000606540 1585 ntBASIC20.6■□□□□ 0.89
ATXN1P54253 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN1P54253 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN1P54253 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN1P54253 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN1P54253 POM121L13P-201ENST00000422362 380 ntBASIC20.6■□□□□ 0.89
ATXN1P54253 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.6■□□□□ 0.89
ATXN1P54253 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.6■□□□□ 0.89
ATXN1P54253 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN1P54253 PRKY-204ENST00000533551 1019 ntBASIC20.6■□□□□ 0.89
ATXN1P54253 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.6■□□□□ 0.89
ATXN1P54253 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN1P54253 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN1P54253 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN1P54253 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.6■□□□□ 0.89
ATXN1P54253 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATXN1P54253 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATXN1P54253 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.6■□□□□ 0.89
ATXN1P54253 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.6■□□□□ 0.89
ATXN1P54253 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.6■□□□□ 0.89
ATXN1P54253 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
ATXN1P54253 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATXN1P54253 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.59■□□□□ 0.89
ATXN1P54253 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.59■□□□□ 0.89
ATXN1P54253 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.59■□□□□ 0.89
ATXN1P54253 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 TMEM179-206ENST00000616017 1645 ntBASIC20.59■□□□□ 0.89
ATXN1P54253 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.59■□□□□ 0.89
ATXN1P54253 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ATXN1P54253 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ATXN1P54253 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.58■□□□□ 0.89
ATXN1P54253 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN1P54253 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN1P54253 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN1P54253 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN1P54253 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN1P54253 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN1P54253 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ATXN1P54253 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.58■□□□□ 0.89
ATXN1P54253 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.58■□□□□ 0.89
ATXN1P54253 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms