Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CLCN4P51793 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CLCN4P51793 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN4P51793 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CLCN4P51793 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLCN4P51793 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
CLCN4P51793 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.69■□□□□ 0.9
CLCN4P51793 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CLCN4P51793 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CLCN4P51793 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLCN4P51793 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CLCN4P51793 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.68■□□□□ 0.9
CLCN4P51793 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN4P51793 BX664615.1-201ENST00000443558 458 ntBASIC20.68■□□□□ 0.9
CLCN4P51793 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.68■□□□□ 0.9
CLCN4P51793 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLCN4P51793 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.68■□□□□ 0.9
CLCN4P51793 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN4P51793 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN4P51793 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.67■□□□□ 0.9
CLCN4P51793 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 AK4P3-201ENST00000418260 669 ntBASIC20.67■□□□□ 0.9
CLCN4P51793 AC004951.3-201ENST00000418645 1148 ntBASIC20.67■□□□□ 0.9
CLCN4P51793 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.67■□□□□ 0.9
CLCN4P51793 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN4P51793 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLCN4P51793 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.67■□□□□ 0.9
CLCN4P51793 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN4P51793 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CLCN4P51793 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
CLCN4P51793 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.66■□□□□ 0.9
CLCN4P51793 HMGA1P5-201ENST00000412453 271 ntBASIC20.66■□□□□ 0.9
CLCN4P51793 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN4P51793 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CLCN4P51793 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN4P51793 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CLCN4P51793 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN4P51793 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN4P51793 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN4P51793 AC096733.2-201ENST00000609937 1394 ntBASIC20.66■□□□□ 0.9
CLCN4P51793 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN4P51793 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN4P51793 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.66■□□□□ 0.9
CLCN4P51793 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CLCN4P51793 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN4P51793 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.66■□□□□ 0.9
CLCN4P51793 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN4P51793 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN4P51793 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CLCN4P51793 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLCN4P51793 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.66■□□□□ 0.9
CLCN4P51793 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
CLCN4P51793 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCN4P51793 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN4P51793 MFAP1P1-201ENST00000442257 1255 ntBASIC20.65■□□□□ 0.9
CLCN4P51793 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.65■□□□□ 0.9
CLCN4P51793 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.65■□□□□ 0.9
CLCN4P51793 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.65■□□□□ 0.9
CLCN4P51793 AC022616.7-201ENST00000525383 220 ntBASIC20.65■□□□□ 0.9
CLCN4P51793 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.65■□□□□ 0.9
CLCN4P51793 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CLCN4P51793 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLCN4P51793 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLCN4P51793 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
CLCN4P51793 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
CLCN4P51793 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLCN4P51793 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms