Protein–RNA interactions for Protein: P49682

CXCR3, C-X-C chemokine receptor type 3, humanhuman

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3P49682 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.35■□□□□ 0.85
CXCR3P49682 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.35■□□□□ 0.85
CXCR3P49682 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CXCR3P49682 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.35■□□□□ 0.85
CXCR3P49682 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.35■□□□□ 0.85
CXCR3P49682 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.35■□□□□ 0.85
CXCR3P49682 AFG3L1P-217ENST00000557444 2447 ntBASIC20.35■□□□□ 0.85
CXCR3P49682 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CXCR3P49682 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CXCR3P49682 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.34■□□□□ 0.85
CXCR3P49682 KRT16P5-201ENST00000455284 522 ntBASIC20.34■□□□□ 0.85
CXCR3P49682 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.34■□□□□ 0.85
CXCR3P49682 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.34■□□□□ 0.85
CXCR3P49682 AC004264.1-201ENST00000608354 794 ntBASIC20.34■□□□□ 0.85
CXCR3P49682 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.34■□□□□ 0.85
CXCR3P49682 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CXCR3P49682 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.34■□□□□ 0.85
CXCR3P49682 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.34■□□□□ 0.85
CXCR3P49682 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CXCR3P49682 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CXCR3P49682 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR3P49682 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.33■□□□□ 0.85
CXCR3P49682 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
CXCR3P49682 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR3P49682 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR3P49682 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.33■□□□□ 0.85
CXCR3P49682 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
CXCR3P49682 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR3P49682 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR3P49682 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CXCR3P49682 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR3P49682 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CXCR3P49682 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.33■□□□□ 0.85
CXCR3P49682 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.33■□□□□ 0.85
CXCR3P49682 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.33■□□□□ 0.85
CXCR3P49682 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.33■□□□□ 0.85
CXCR3P49682 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CXCR3P49682 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CXCR3P49682 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CXCR3P49682 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.33■□□□□ 0.84
CXCR3P49682 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR3P49682 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR3P49682 TREX1-205ENST00000625293 1783 ntBASIC20.32■□□□□ 0.84
CXCR3P49682 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 TUBB8P6-201ENST00000436895 1288 ntBASIC20.32■□□□□ 0.84
CXCR3P49682 AL158047.1-201ENST00000445918 881 ntBASIC20.32■□□□□ 0.84
CXCR3P49682 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CXCR3P49682 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.32■□□□□ 0.84
CXCR3P49682 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR3P49682 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR3P49682 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR3P49682 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.32■□□□□ 0.84
CXCR3P49682 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR3P49682 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CXCR3P49682 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CXCR3P49682 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.31■□□□□ 0.84
CXCR3P49682 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.31■□□□□ 0.84
CXCR3P49682 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CXCR3P49682 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.31■□□□□ 0.84
CXCR3P49682 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.31■□□□□ 0.84
CXCR3P49682 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.31■□□□□ 0.84
CXCR3P49682 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.31■□□□□ 0.84
CXCR3P49682 FAM197Y4-202ENST00000622692 608 ntBASIC20.31■□□□□ 0.84
CXCR3P49682 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.31■□□□□ 0.84
CXCR3P49682 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CXCR3P49682 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CXCR3P49682 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms