Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
MTHFRP42898 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.57■□□□□ 0.88
MTHFRP42898 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.57■□□□□ 0.88
MTHFRP42898 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
MTHFRP42898 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
MTHFRP42898 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MTHFRP42898 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MTHFRP42898 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.56■□□□□ 0.88
MTHFRP42898 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 TFP1-202ENST00000475455 1573 ntBASIC20.56■□□□□ 0.88
MTHFRP42898 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
MTHFRP42898 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.56■□□□□ 0.88
MTHFRP42898 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.56■□□□□ 0.88
MTHFRP42898 AC139887.4-201ENST00000607877 719 ntBASIC20.56■□□□□ 0.88
MTHFRP42898 AL138966.2-201ENST00000621997 464 ntBASIC20.56■□□□□ 0.88
MTHFRP42898 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.56■□□□□ 0.88
MTHFRP42898 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
MTHFRP42898 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MTHFRP42898 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.55■□□□□ 0.88
MTHFRP42898 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.55■□□□□ 0.88
MTHFRP42898 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 AL031133.1-201ENST00000406807 723 ntBASIC20.55■□□□□ 0.88
MTHFRP42898 AC092647.4-201ENST00000457211 535 ntBASIC20.55■□□□□ 0.88
MTHFRP42898 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 AC011298.2-201ENST00000617989 482 ntBASIC20.55■□□□□ 0.88
MTHFRP42898 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
MTHFRP42898 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.55■□□□□ 0.88
MTHFRP42898 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.55■□□□□ 0.88
MTHFRP42898 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.55■□□□□ 0.88
MTHFRP42898 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MTHFRP42898 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
MTHFRP42898 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MTHFRP42898 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.54■□□□□ 0.88
MTHFRP42898 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.54■□□□□ 0.88
MTHFRP42898 AC004951.3-201ENST00000418645 1148 ntBASIC20.54■□□□□ 0.88
MTHFRP42898 TSPY5P-201ENST00000426936 936 ntBASIC20.54■□□□□ 0.88
MTHFRP42898 SLC25A1P2-201ENST00000430693 912 ntBASIC20.54■□□□□ 0.88
MTHFRP42898 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MTHFRP42898 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.54■□□□□ 0.88
MTHFRP42898 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
MTHFRP42898 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.54■□□□□ 0.88
MTHFRP42898 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MTHFRP42898 AP000550.4-202ENST00000639755 178 ntBASIC20.54■□□□□ 0.88
MTHFRP42898 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.54■□□□□ 0.88
MTHFRP42898 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MTHFRP42898 RCC2P6-201ENST00000526625 1557 ntBASIC20.54■□□□□ 0.88
MTHFRP42898 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.54■□□□□ 0.88
MTHFRP42898 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.54■□□□□ 0.88
MTHFRP42898 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MTHFRP42898 AL049796.1-201ENST00000565336 1766 ntBASIC20.54■□□□□ 0.88
MTHFRP42898 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MTHFRP42898 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MTHFRP42898 KRT16P6-202ENST00000425692 1426 ntBASIC20.53■□□□□ 0.88
MTHFRP42898 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 MFAP1P1-201ENST00000442257 1255 ntBASIC20.53■□□□□ 0.88
MTHFRP42898 FAM207BP-201ENST00000447172 505 ntBASIC20.53■□□□□ 0.88
MTHFRP42898 COX11P1-201ENST00000489116 835 ntBASIC20.53■□□□□ 0.88
MTHFRP42898 YBX1P2-201ENST00000489612 999 ntBASIC20.53■□□□□ 0.88
MTHFRP42898 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.53■□□□□ 0.88
MTHFRP42898 KRT18P56-201ENST00000507275 550 ntBASIC20.53■□□□□ 0.88
MTHFRP42898 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.53■□□□□ 0.88
MTHFRP42898 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MTHFRP42898 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.53■□□□□ 0.88
MTHFRP42898 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MTHFRP42898 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
MTHFRP42898 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.53■□□□□ 0.88
MTHFRP42898 AC010653.2-201ENST00000623505 997 ntBASIC20.53■□□□□ 0.88
MTHFRP42898 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MTHFRP42898 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.53■□□□□ 0.88
MTHFRP42898 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MTHFRP42898 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MTHFRP42898 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MTHFRP42898 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MTHFRP42898 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.52■□□□□ 0.88
MTHFRP42898 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.52■□□□□ 0.88
MTHFRP42898 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MTHFRP42898 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms