Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 LINC01006-201ENST00000333319 2292 ntBASIC18.65■□□□□ 0.58
RORAP35398 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.65■□□□□ 0.58
RORAP35398 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.65■□□□□ 0.58
RORAP35398 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.65■□□□□ 0.58
RORAP35398 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 NUDT16P1-203ENST00000513809 620 ntBASIC18.65■□□□□ 0.58
RORAP35398 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.65■□□□□ 0.58
RORAP35398 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.65■□□□□ 0.58
RORAP35398 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.65■□□□□ 0.58
RORAP35398 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.65■□□□□ 0.58
RORAP35398 AL157384.1-201ENST00000445995 2473 ntBASIC18.65■□□□□ 0.58
RORAP35398 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RORAP35398 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.65■□□□□ 0.58
RORAP35398 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RORAP35398 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RORAP35398 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.64■□□□□ 0.58
RORAP35398 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.58
RORAP35398 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RORAP35398 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
RORAP35398 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 KSR1P1-201ENST00000446298 240 ntBASIC18.64■□□□□ 0.57
RORAP35398 C1QL1P1-201ENST00000568105 661 ntBASIC18.64■□□□□ 0.57
RORAP35398 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
RORAP35398 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.64■□□□□ 0.57
RORAP35398 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RORAP35398 PHGDH-210ENST00000641115 1638 ntBASIC18.63■□□□□ 0.57
RORAP35398 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RORAP35398 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RORAP35398 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
RORAP35398 LINC01521-201ENST00000504184 1943 ntBASIC18.63■□□□□ 0.57
RORAP35398 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.63■□□□□ 0.57
RORAP35398 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.63■□□□□ 0.57
RORAP35398 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 YBX1P10-201ENST00000444752 975 ntBASIC18.63■□□□□ 0.57
RORAP35398 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.63■□□□□ 0.57
RORAP35398 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.63■□□□□ 0.57
RORAP35398 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.63■□□□□ 0.57
RORAP35398 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.63■□□□□ 0.57
RORAP35398 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RORAP35398 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.63■□□□□ 0.57
RORAP35398 BX119927.1-201ENST00000636596 1552 ntBASIC18.63■□□□□ 0.57
RORAP35398 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.63■□□□□ 0.57
RORAP35398 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RORAP35398 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.63■□□□□ 0.57
RORAP35398 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RORAP35398 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.62■□□□□ 0.57
RORAP35398 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.62■□□□□ 0.57
RORAP35398 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.62■□□□□ 0.57
RORAP35398 AC012306.2-201ENST00000609350 630 ntBASIC18.62■□□□□ 0.57
RORAP35398 REXO1L10P-201ENST00000615707 1290 ntBASIC18.62■□□□□ 0.57
RORAP35398 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RORAP35398 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.62■□□□□ 0.57
RORAP35398 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
RORAP35398 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.62■□□□□ 0.57
RORAP35398 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.62■□□□□ 0.57
RORAP35398 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RORAP35398 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms