Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC31.24■■■□□ 2.59
CLIP1P30622 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CLIP1P30622 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC31.24■■■□□ 2.59
CLIP1P30622 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CLIP1P30622 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CLIP1P30622 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
CLIP1P30622 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CLIP1P30622 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC31.24■■■□□ 2.59
CLIP1P30622 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CLIP1P30622 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
CLIP1P30622 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC31.24■■■□□ 2.59
CLIP1P30622 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC31.24■■■□□ 2.59
CLIP1P30622 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC31.24■■■□□ 2.59
CLIP1P30622 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC31.24■■■□□ 2.59
CLIP1P30622 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC31.24■■■□□ 2.59
CLIP1P30622 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CLIP1P30622 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
CLIP1P30622 AL031985.4-201ENST00000642138 673 ntBASIC31.24■■■□□ 2.59
CLIP1P30622 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
CLIP1P30622 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC31.23■■■□□ 2.59
CLIP1P30622 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
CLIP1P30622 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC31.23■■■□□ 2.59
CLIP1P30622 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC31.23■■■□□ 2.59
CLIP1P30622 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC31.23■■■□□ 2.59
CLIP1P30622 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CLIP1P30622 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC31.23■■■□□ 2.59
CLIP1P30622 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC31.23■■■□□ 2.59
CLIP1P30622 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
CLIP1P30622 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CLIP1P30622 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC31.23■■■□□ 2.59
CLIP1P30622 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
CLIP1P30622 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CLIP1P30622 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
CLIP1P30622 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CLIP1P30622 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CLIP1P30622 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC31.22■■■□□ 2.59
CLIP1P30622 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC31.22■■■□□ 2.59
CLIP1P30622 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CLIP1P30622 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC31.21■■■□□ 2.59
CLIP1P30622 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CLIP1P30622 LINC01521-201ENST00000504184 1943 ntBASIC31.21■■■□□ 2.59
CLIP1P30622 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC31.21■■■□□ 2.59
CLIP1P30622 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CLIP1P30622 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC31.21■■■□□ 2.59
CLIP1P30622 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC31.21■■■□□ 2.59
CLIP1P30622 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CLIP1P30622 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CLIP1P30622 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
CLIP1P30622 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC31.21■■■□□ 2.59
CLIP1P30622 RN7SL850P-201ENST00000579959 291 ntBASIC31.21■■■□□ 2.59
CLIP1P30622 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC31.21■■■□□ 2.59
CLIP1P30622 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CLIP1P30622 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CLIP1P30622 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CLIP1P30622 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC31.2■■■□□ 2.59
CLIP1P30622 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC31.2■■■□□ 2.59
CLIP1P30622 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC31.2■■■□□ 2.59
CLIP1P30622 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC31.2■■■□□ 2.59
CLIP1P30622 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CLIP1P30622 MMP23A-201ENST00000234610 1017 ntBASIC31.2■■■□□ 2.59
CLIP1P30622 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC31.2■■■□□ 2.59
CLIP1P30622 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CLIP1P30622 AL390955.1-201ENST00000428694 934 ntBASIC31.2■■■□□ 2.59
CLIP1P30622 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC31.2■■■□□ 2.59
CLIP1P30622 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC31.2■■■□□ 2.59
CLIP1P30622 Z85996.1-201ENST00000494644 937 ntBASIC31.2■■■□□ 2.59
CLIP1P30622 MIR6786-201ENST00000616843 113 ntBASIC31.2■■■□□ 2.59
CLIP1P30622 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC31.2■■■□□ 2.58
CLIP1P30622 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CLIP1P30622 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
CLIP1P30622 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.58
CLIP1P30622 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CLIP1P30622 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC31.19■■■□□ 2.58
CLIP1P30622 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CLIP1P30622 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 AC011506.1-201ENST00000474329 610 ntBASIC31.19■■■□□ 2.58
CLIP1P30622 NME1-207ENST00000480143 964 ntTSL 2 BASIC31.19■■■□□ 2.58
CLIP1P30622 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC31.19■■■□□ 2.58
CLIP1P30622 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC31.19■■■□□ 2.58
CLIP1P30622 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
CLIP1P30622 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC31.19■■■□□ 2.58
CLIP1P30622 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CLIP1P30622 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CLIP1P30622 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CLIP1P30622 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC31.18■■■□□ 2.58
CLIP1P30622 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CLIP1P30622 UNC93B2-201ENST00000285383 730 ntBASIC31.18■■■□□ 2.58
CLIP1P30622 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CLIP1P30622 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC31.18■■■□□ 2.58
CLIP1P30622 TMPOP1-202ENST00000424642 1267 ntBASIC31.18■■■□□ 2.58
CLIP1P30622 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC31.18■■■□□ 2.58
CLIP1P30622 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC31.18■■■□□ 2.58
CLIP1P30622 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CLIP1P30622 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC31.18■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms