Protein–RNA interactions for Protein: P25054

APC, Adenomatous polyposis coli protein, humanhuman

Predictions only

Length 2,843 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APCP25054 AC106795.1-205ENST00000512851 1056 ntBASIC16.61■□□□□ 0.25
APCP25054 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 MIR2861-201ENST00000636310 90 ntBASIC16.61■□□□□ 0.25
APCP25054 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 BX119927.1-201ENST00000636596 1552 ntBASIC16.61■□□□□ 0.25
APCP25054 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
APCP25054 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.61■□□□□ 0.25
APCP25054 KRT18P13-201ENST00000400056 1290 ntBASIC16.61■□□□□ 0.25
APCP25054 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
APCP25054 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 AP002383.4-201ENST00000442518 975 ntBASIC16.6■□□□□ 0.25
APCP25054 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.6■□□□□ 0.25
APCP25054 HLA-A-201ENST00000376802 1334 ntBASIC16.6■□□□□ 0.25
APCP25054 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
APCP25054 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
APCP25054 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.6■□□□□ 0.25
APCP25054 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.6■□□□□ 0.25
APCP25054 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.6■□□□□ 0.25
APCP25054 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.6■□□□□ 0.25
APCP25054 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
APCP25054 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.6■□□□□ 0.25
APCP25054 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.6■□□□□ 0.25
APCP25054 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
APCP25054 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
APCP25054 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
APCP25054 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
APCP25054 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
APCP25054 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
APCP25054 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
APCP25054 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.59■□□□□ 0.25
APCP25054 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
APCP25054 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.59■□□□□ 0.25
APCP25054 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.59■□□□□ 0.25
APCP25054 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.59■□□□□ 0.25
APCP25054 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.59■□□□□ 0.25
APCP25054 AC079781.3-201ENST00000449110 356 ntBASIC16.59■□□□□ 0.25
APCP25054 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
APCP25054 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.59■□□□□ 0.25
APCP25054 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.59■□□□□ 0.25
APCP25054 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.59■□□□□ 0.25
APCP25054 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
APCP25054 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.59■□□□□ 0.25
APCP25054 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.59■□□□□ 0.25
APCP25054 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.59■□□□□ 0.25
APCP25054 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 AC016734.2-201ENST00000624325 1377 ntBASIC16.59■□□□□ 0.25
APCP25054 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
APCP25054 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.59■□□□□ 0.25
APCP25054 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
APCP25054 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
APCP25054 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.58■□□□□ 0.25
APCP25054 AL645929.1-201ENST00000420084 975 ntBASIC16.58■□□□□ 0.25
APCP25054 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.58■□□□□ 0.25
APCP25054 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.58■□□□□ 0.25
APCP25054 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.58■□□□□ 0.25
APCP25054 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
APCP25054 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APCP25054 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
APCP25054 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APCP25054 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
APCP25054 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APCP25054 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
APCP25054 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.58■□□□□ 0.24
APCP25054 AC120114.3-201ENST00000611923 658 ntBASIC16.58■□□□□ 0.24
APCP25054 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.58■□□□□ 0.24
APCP25054 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
APCP25054 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
APCP25054 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APCP25054 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APCP25054 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.57■□□□□ 0.24
APCP25054 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
APCP25054 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
APCP25054 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms