Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX1P22670 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
RFX1P22670 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX1P22670 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX1P22670 SOX15-203ENST00000570788 1093 ntBASIC21.37■■□□□ 1.01
RFX1P22670 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.37■■□□□ 1.01
RFX1P22670 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX1P22670 TREX1-205ENST00000625293 1783 ntBASIC21.37■■□□□ 1.01
RFX1P22670 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX1P22670 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.37■■□□□ 1.01
RFX1P22670 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX1P22670 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX1P22670 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFX1P22670 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.37■■□□□ 1.01
RFX1P22670 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RFX1P22670 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.36■■□□□ 1.01
RFX1P22670 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.36■■□□□ 1.01
RFX1P22670 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.36■■□□□ 1.01
RFX1P22670 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.36■■□□□ 1.01
RFX1P22670 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
RFX1P22670 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.36■■□□□ 1.01
RFX1P22670 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.36■■□□□ 1.01
RFX1P22670 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
RFX1P22670 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RFX1P22670 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX1P22670 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
RFX1P22670 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.35■■□□□ 1.01
RFX1P22670 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.35■■□□□ 1.01
RFX1P22670 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RFX1P22670 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.35■■□□□ 1.01
RFX1P22670 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.35■■□□□ 1.01
RFX1P22670 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.35■■□□□ 1.01
RFX1P22670 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RFX1P22670 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RFX1P22670 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
RFX1P22670 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFX1P22670 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX1P22670 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC21.34■■□□□ 1.01
RFX1P22670 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
RFX1P22670 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
RFX1P22670 KRT17P2-201ENST00000300992 1314 ntBASIC21.33■■□□□ 1.01
RFX1P22670 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RFX1P22670 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.33■■□□□ 1.01
RFX1P22670 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.33■■□□□ 1.01
RFX1P22670 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC21.33■■□□□ 1.01
RFX1P22670 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.33■■□□□ 1.01
RFX1P22670 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.33■■□□□ 1.01
RFX1P22670 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFX1P22670 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.33■■□□□ 1.01
RFX1P22670 AC069544.1-201ENST00000609399 999 ntBASIC21.33■■□□□ 1.01
RFX1P22670 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
RFX1P22670 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.33■■□□□ 1
RFX1P22670 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.33■■□□□ 1
RFX1P22670 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
RFX1P22670 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFX1P22670 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.33■■□□□ 1
RFX1P22670 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms