Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.71■□□□□ 0.75
VCLP18206 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.71■□□□□ 0.75
VCLP18206 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.71■□□□□ 0.75
VCLP18206 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
VCLP18206 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
VCLP18206 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.71■□□□□ 0.75
VCLP18206 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.71■□□□□ 0.75
VCLP18206 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.71■□□□□ 0.75
VCLP18206 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 AC006058.3-201ENST00000606217 1069 ntBASIC19.71■□□□□ 0.75
VCLP18206 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
VCLP18206 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.71■□□□□ 0.75
VCLP18206 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.71■□□□□ 0.75
VCLP18206 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VCLP18206 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.71■□□□□ 0.75
VCLP18206 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.7■□□□□ 0.74
VCLP18206 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.7■□□□□ 0.74
VCLP18206 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.7■□□□□ 0.74
VCLP18206 AC008687.6-201ENST00000596318 630 ntBASIC19.7■□□□□ 0.74
VCLP18206 AL031963.3-201ENST00000606441 850 ntBASIC19.7■□□□□ 0.74
VCLP18206 ITM2C-210ENST00000620962 501 ntBASIC19.7■□□□□ 0.74
VCLP18206 TMEM191A-211ENST00000637163 1067 ntBASIC19.7■□□□□ 0.74
VCLP18206 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
VCLP18206 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VCLP18206 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
VCLP18206 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
VCLP18206 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
VCLP18206 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
VCLP18206 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
VCLP18206 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.69■□□□□ 0.74
VCLP18206 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.69■□□□□ 0.74
VCLP18206 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.69■□□□□ 0.74
VCLP18206 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
VCLP18206 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VCLP18206 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.69■□□□□ 0.74
VCLP18206 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.69■□□□□ 0.74
VCLP18206 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.69■□□□□ 0.74
VCLP18206 AC006557.6-201ENST00000623071 864 ntBASIC19.69■□□□□ 0.74
VCLP18206 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.69■□□□□ 0.74
VCLP18206 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.69■□□□□ 0.74
VCLP18206 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VCLP18206 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VCLP18206 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.68■□□□□ 0.74
VCLP18206 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.68■□□□□ 0.74
VCLP18206 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 POM121L13P-201ENST00000422362 380 ntBASIC19.68■□□□□ 0.74
VCLP18206 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.68■□□□□ 0.74
VCLP18206 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VCLP18206 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.68■□□□□ 0.74
VCLP18206 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
VCLP18206 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VCLP18206 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.68■□□□□ 0.74
VCLP18206 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
VCLP18206 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.67■□□□□ 0.74
VCLP18206 TCF3P1-201ENST00000423021 1937 ntBASIC19.67■□□□□ 0.74
VCLP18206 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.67■□□□□ 0.74
VCLP18206 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VCLP18206 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms