Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.67■■□□□ 1.06
ATP2A2P16615 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP2A2P16615 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.67■■□□□ 1.06
ATP2A2P16615 AF106564.1-201ENST00000607058 2553 ntBASIC21.67■■□□□ 1.06
ATP2A2P16615 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A2P16615 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A2P16615 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A2P16615 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ATP2A2P16615 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
ATP2A2P16615 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.66■■□□□ 1.06
ATP2A2P16615 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A2P16615 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A2P16615 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A2P16615 C2orf69P3-201ENST00000565542 1120 ntBASIC21.66■■□□□ 1.06
ATP2A2P16615 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A2P16615 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A2P16615 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.66■■□□□ 1.06
ATP2A2P16615 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.66■■□□□ 1.06
ATP2A2P16615 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ATP2A2P16615 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.66■■□□□ 1.06
ATP2A2P16615 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
ATP2A2P16615 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 AC011484.1-201ENST00000377652 1995 ntBASIC21.65■■□□□ 1.06
ATP2A2P16615 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP2A2P16615 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ATP2A2P16615 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 UPK3BP1-201ENST00000428678 509 ntBASIC21.65■■□□□ 1.06
ATP2A2P16615 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP2A2P16615 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2A2P16615 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC21.65■■□□□ 1.06
ATP2A2P16615 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.65■■□□□ 1.06
ATP2A2P16615 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2A2P16615 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.65■■□□□ 1.06
ATP2A2P16615 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ATP2A2P16615 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.65■■□□□ 1.06
ATP2A2P16615 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ATP2A2P16615 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.06
ATP2A2P16615 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ATP2A2P16615 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ATP2A2P16615 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
ATP2A2P16615 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2A2P16615 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A2P16615 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.64■■□□□ 1.05
ATP2A2P16615 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A2P16615 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2A2P16615 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A2P16615 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A2P16615 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2A2P16615 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.64■■□□□ 1.05
ATP2A2P16615 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ATP2A2P16615 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.64■■□□□ 1.05
ATP2A2P16615 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 KRT8P36-201ENST00000489121 1440 ntBASIC21.63■■□□□ 1.05
ATP2A2P16615 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2A2P16615 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ATP2A2P16615 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2A2P16615 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.63■■□□□ 1.05
ATP2A2P16615 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.63■■□□□ 1.05
ATP2A2P16615 AL031985.4-201ENST00000642138 673 ntBASIC21.63■■□□□ 1.05
ATP2A2P16615 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ATP2A2P16615 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ATP2A2P16615 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ATP2A2P16615 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.63■■□□□ 1.05
ATP2A2P16615 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.62■■□□□ 1.05
ATP2A2P16615 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A2P16615 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A2P16615 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A2P16615 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A2P16615 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2A2P16615 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.62■■□□□ 1.05
ATP2A2P16615 ECEL1P2-202ENST00000465689 757 ntBASIC21.62■■□□□ 1.05
ATP2A2P16615 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC21.62■■□□□ 1.05
ATP2A2P16615 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A2P16615 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
ATP2A2P16615 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A2P16615 AC091076.1-201ENST00000610741 619 ntBASIC21.62■■□□□ 1.05
ATP2A2P16615 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.62■■□□□ 1.05
ATP2A2P16615 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms