Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.09■□□□□ 0.65
PCNAP12004 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCNAP12004 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCNAP12004 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.09■□□□□ 0.65
PCNAP12004 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCNAP12004 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCNAP12004 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCNAP12004 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCNAP12004 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.08■□□□□ 0.65
PCNAP12004 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCNAP12004 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.08■□□□□ 0.64
PCNAP12004 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
PCNAP12004 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.08■□□□□ 0.64
PCNAP12004 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PCNAP12004 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCNAP12004 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.08■□□□□ 0.64
PCNAP12004 AC018445.3-201ENST00000624177 1945 ntBASIC19.08■□□□□ 0.64
PCNAP12004 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.07■□□□□ 0.64
PCNAP12004 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.07■□□□□ 0.64
PCNAP12004 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCNAP12004 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
PCNAP12004 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.07■□□□□ 0.64
PCNAP12004 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.07■□□□□ 0.64
PCNAP12004 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.07■□□□□ 0.64
PCNAP12004 AC104771.1-201ENST00000603335 964 ntBASIC19.07■□□□□ 0.64
PCNAP12004 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCNAP12004 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCNAP12004 PHGDH-210ENST00000641115 1638 ntBASIC19.07■□□□□ 0.64
PCNAP12004 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC19.07■□□□□ 0.64
PCNAP12004 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.06■□□□□ 0.64
PCNAP12004 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC19.06■□□□□ 0.64
PCNAP12004 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.06■□□□□ 0.64
PCNAP12004 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.06■□□□□ 0.64
PCNAP12004 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.06■□□□□ 0.64
PCNAP12004 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PCNAP12004 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.05■□□□□ 0.64
PCNAP12004 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
PCNAP12004 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
PCNAP12004 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
PCNAP12004 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.05■□□□□ 0.64
PCNAP12004 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.05■□□□□ 0.64
PCNAP12004 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.05■□□□□ 0.64
PCNAP12004 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.05■□□□□ 0.64
PCNAP12004 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.05■□□□□ 0.64
PCNAP12004 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.05■□□□□ 0.64
PCNAP12004 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.05■□□□□ 0.64
PCNAP12004 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 AC006557.6-201ENST00000623071 864 ntBASIC19.05■□□□□ 0.64
PCNAP12004 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.05■□□□□ 0.64
PCNAP12004 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PCNAP12004 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.05■□□□□ 0.64
PCNAP12004 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PCNAP12004 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms