Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.6■□□□□ 0.89
RARAP10276 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.6■□□□□ 0.89
RARAP10276 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RARAP10276 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARAP10276 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARAP10276 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RARAP10276 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.59■□□□□ 0.89
RARAP10276 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.59■□□□□ 0.89
RARAP10276 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
RARAP10276 AC073210.2-201ENST00000430369 194 ntBASIC20.59■□□□□ 0.89
RARAP10276 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.59■□□□□ 0.89
RARAP10276 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.59■□□□□ 0.89
RARAP10276 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RARAP10276 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RARAP10276 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
RARAP10276 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.59■□□□□ 0.89
RARAP10276 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RARAP10276 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.59■□□□□ 0.89
RARAP10276 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARAP10276 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARAP10276 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RARAP10276 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.58■□□□□ 0.89
RARAP10276 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.58■□□□□ 0.89
RARAP10276 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
RARAP10276 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RARAP10276 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.58■□□□□ 0.89
RARAP10276 AL390719.1-204ENST00000412397 1219 ntBASIC20.58■□□□□ 0.89
RARAP10276 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.58■□□□□ 0.89
RARAP10276 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.58■□□□□ 0.89
RARAP10276 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.58■□□□□ 0.89
RARAP10276 AC083880.1-201ENST00000608266 535 ntBASIC20.58■□□□□ 0.89
RARAP10276 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RARAP10276 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.58■□□□□ 0.88
RARAP10276 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RARAP10276 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RARAP10276 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RARAP10276 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.58■□□□□ 0.88
RARAP10276 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RARAP10276 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
RARAP10276 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.58■□□□□ 0.88
RARAP10276 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RARAP10276 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.57■□□□□ 0.88
RARAP10276 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.57■□□□□ 0.88
RARAP10276 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 AC142086.2-201ENST00000569753 217 ntBASIC20.57■□□□□ 0.88
RARAP10276 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.57■□□□□ 0.88
RARAP10276 AC006557.6-201ENST00000623071 864 ntBASIC20.57■□□□□ 0.88
RARAP10276 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.57■□□□□ 0.88
RARAP10276 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RARAP10276 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.57■□□□□ 0.88
RARAP10276 AC004408.2-201ENST00000623613 2777 ntBASIC20.57■□□□□ 0.88
RARAP10276 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.56■□□□□ 0.88
RARAP10276 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.56■□□□□ 0.88
RARAP10276 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.56■□□□□ 0.88
RARAP10276 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.56■□□□□ 0.88
RARAP10276 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RARAP10276 AC069152.1-201ENST00000438030 544 ntBASIC20.56■□□□□ 0.88
RARAP10276 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.56■□□□□ 0.88
RARAP10276 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RARAP10276 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RARAP10276 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RARAP10276 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.56■□□□□ 0.88
RARAP10276 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RARAP10276 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms