Protein–RNA interactions for Protein: P0DJJ0

SRGAP2C, SLIT-ROBO Rho GTPase-activating protein 2C, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2CP0DJJ0 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SRGAP2CP0DJJ0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 NIFKP9-201ENST00000419265 221 ntBASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 AP003071.4-201ENST00000562276 1284 ntBASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 AC112907.3-201ENST00000577781 2400 ntBASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SRGAP2CP0DJJ0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 TMEM179-206ENST00000616017 1645 ntBASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 KSR1P1-201ENST00000446298 240 ntBASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 AL355075.4-201ENST00000554988 638 ntBASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 C1QL1P1-201ENST00000568105 661 ntBASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SRGAP2CP0DJJ0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.59■■□□□ 1.05
SRGAP2CP0DJJ0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 REXO1L12P-201ENST00000622156 912 ntBASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
SRGAP2CP0DJJ0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SRGAP2CP0DJJ0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SRGAP2CP0DJJ0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SRGAP2CP0DJJ0 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SRGAP2CP0DJJ0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
SRGAP2CP0DJJ0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 KRT16P1-201ENST00000399124 1418 ntBASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SRGAP2CP0DJJ0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms