Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MT-ND1P03886 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.49■□□□□ 0.55
MT-ND1P03886 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
MT-ND1P03886 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
MT-ND1P03886 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MT-ND1P03886 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.49■□□□□ 0.55
MT-ND1P03886 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.49■□□□□ 0.55
MT-ND1P03886 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.49■□□□□ 0.55
MT-ND1P03886 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MT-ND1P03886 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND1P03886 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND1P03886 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND1P03886 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
MT-ND1P03886 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
MT-ND1P03886 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
MT-ND1P03886 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
MT-ND1P03886 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-ND1P03886 CDV3P1-201ENST00000471403 739 ntBASIC18.48■□□□□ 0.55
MT-ND1P03886 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND1P03886 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.48■□□□□ 0.55
MT-ND1P03886 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
MT-ND1P03886 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND1P03886 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.48■□□□□ 0.55
MT-ND1P03886 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-ND1P03886 LETM1P2-201ENST00000597330 2178 ntBASIC18.48■□□□□ 0.55
MT-ND1P03886 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND1P03886 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
MT-ND1P03886 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.48■□□□□ 0.55
MT-ND1P03886 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
MT-ND1P03886 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND1P03886 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.47■□□□□ 0.55
MT-ND1P03886 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
MT-ND1P03886 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND1P03886 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.47■□□□□ 0.55
MT-ND1P03886 MYCNOS-205ENST00000641950 531 ntBASIC18.47■□□□□ 0.55
MT-ND1P03886 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.47■□□□□ 0.55
MT-ND1P03886 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.47■□□□□ 0.55
MT-ND1P03886 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 AL049812.1-201ENST00000432563 2267 ntBASIC18.47■□□□□ 0.55
MT-ND1P03886 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 AC018470.1-201ENST00000624790 3129 ntBASIC18.47■□□□□ 0.55
MT-ND1P03886 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.47■□□□□ 0.55
MT-ND1P03886 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MT-ND1P03886 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
MT-ND1P03886 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MT-ND1P03886 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
MT-ND1P03886 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 PTBP1P-201ENST00000554374 1601 ntBASIC18.46■□□□□ 0.55
MT-ND1P03886 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
MT-ND1P03886 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.46■□□□□ 0.55
MT-ND1P03886 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 AC034268.1-201ENST00000441047 882 ntBASIC18.46■□□□□ 0.55
MT-ND1P03886 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.46■□□□□ 0.55
MT-ND1P03886 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.46■□□□□ 0.55
MT-ND1P03886 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.46■□□□□ 0.55
MT-ND1P03886 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.46■□□□□ 0.55
MT-ND1P03886 NTF6G-201ENST00000591094 616 ntBASIC18.46■□□□□ 0.55
MT-ND1P03886 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.46■□□□□ 0.55
MT-ND1P03886 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
MT-ND1P03886 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
MT-ND1P03886 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MT-ND1P03886 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
MT-ND1P03886 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
MT-ND1P03886 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms