Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.7■□□□□ 0.74
TRBC1P01850 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.7■□□□□ 0.74
TRBC1P01850 AC004264.1-201ENST00000608354 794 ntBASIC19.7■□□□□ 0.74
TRBC1P01850 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.7■□□□□ 0.74
TRBC1P01850 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
TRBC1P01850 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRBC1P01850 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.69■□□□□ 0.74
TRBC1P01850 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TRBC1P01850 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
TRBC1P01850 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 KRT16P5-201ENST00000455284 522 ntBASIC19.69■□□□□ 0.74
TRBC1P01850 KRT18P16-201ENST00000510337 1294 ntBASIC19.69■□□□□ 0.74
TRBC1P01850 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRBC1P01850 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.69■□□□□ 0.74
TRBC1P01850 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBC1P01850 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.69■□□□□ 0.74
TRBC1P01850 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.69■□□□□ 0.74
TRBC1P01850 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRBC1P01850 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBC1P01850 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRBC1P01850 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRBC1P01850 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRBC1P01850 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.69■□□□□ 0.74
TRBC1P01850 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TRBC1P01850 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TRBC1P01850 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.68■□□□□ 0.74
TRBC1P01850 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
TRBC1P01850 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBC1P01850 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBC1P01850 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.68■□□□□ 0.74
TRBC1P01850 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.68■□□□□ 0.74
TRBC1P01850 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBC1P01850 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.68■□□□□ 0.74
TRBC1P01850 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
TRBC1P01850 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRBC1P01850 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
TRBC1P01850 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBC1P01850 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
TRBC1P01850 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.67■□□□□ 0.74
TRBC1P01850 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBC1P01850 UBE2SP1-201ENST00000450587 669 ntBASIC19.67■□□□□ 0.74
TRBC1P01850 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBC1P01850 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRBC1P01850 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBC1P01850 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.67■□□□□ 0.74
TRBC1P01850 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.67■□□□□ 0.74
TRBC1P01850 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRBC1P01850 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.67■□□□□ 0.74
TRBC1P01850 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRBC1P01850 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBC1P01850 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TRBC1P01850 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBC1P01850 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBC1P01850 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBC1P01850 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBC1P01850 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBC1P01850 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRBC1P01850 TUBB8P6-201ENST00000436895 1288 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms