Protein–RNA interactions for Protein: O95521

PRAMEF1, PRAME family member 1, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1O95521 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRAMEF1O95521 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF1O95521 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF1O95521 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF1O95521 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRAMEF1O95521 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 YBX1P10-201ENST00000444752 975 ntBASIC19.54■□□□□ 0.72
PRAMEF1O95521 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.54■□□□□ 0.72
PRAMEF1O95521 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PRAMEF1O95521 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRAMEF1O95521 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.53■□□□□ 0.72
PRAMEF1O95521 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 ABHD17AP1-201ENST00000358206 933 ntBASIC19.53■□□□□ 0.72
PRAMEF1O95521 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 KRT18P29-201ENST00000397031 1267 ntBASIC19.53■□□□□ 0.72
PRAMEF1O95521 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 AC239809.2-201ENST00000415381 517 ntBASIC19.53■□□□□ 0.72
PRAMEF1O95521 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 AL023875.1-201ENST00000640777 796 ntBASIC19.53■□□□□ 0.72
PRAMEF1O95521 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRAMEF1O95521 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PRAMEF1O95521 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF1O95521 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF1O95521 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF1O95521 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF1O95521 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF1O95521 RN7SL471P-201ENST00000580476 299 ntBASIC19.52■□□□□ 0.72
PRAMEF1O95521 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF1O95521 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PRAMEF1O95521 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRAMEF1O95521 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.52■□□□□ 0.71
PRAMEF1O95521 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEF1O95521 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRAMEF1O95521 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.52■□□□□ 0.71
PRAMEF1O95521 AL158211.5-201ENST00000623583 2518 ntBASIC19.52■□□□□ 0.71
PRAMEF1O95521 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.71
PRAMEF1O95521 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF1O95521 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
PRAMEF1O95521 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF1O95521 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF1O95521 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF1O95521 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.51■□□□□ 0.71
PRAMEF1O95521 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF1O95521 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
PRAMEF1O95521 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF1O95521 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.51■□□□□ 0.71
PRAMEF1O95521 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRAMEF1O95521 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PRAMEF1O95521 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms