Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
SCAF4O95104 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.05■□□□□ 0.16
SCAF4O95104 DPP3P2-201ENST00000416030 1696 ntBASIC16.05■□□□□ 0.16
SCAF4O95104 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SCAF4O95104 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
SCAF4O95104 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.04■□□□□ 0.16
SCAF4O95104 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 Z82202.1-201ENST00000623446 1880 ntBASIC16.04■□□□□ 0.16
SCAF4O95104 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
SCAF4O95104 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.04■□□□□ 0.16
SCAF4O95104 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.04■□□□□ 0.16
SCAF4O95104 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SCAF4O95104 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.03■□□□□ 0.16
SCAF4O95104 AC007613.1-201ENST00000572811 2597 ntBASIC16.03■□□□□ 0.16
SCAF4O95104 AC093484.2-201ENST00000580996 2166 ntBASIC16.03■□□□□ 0.16
SCAF4O95104 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SCAF4O95104 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
SCAF4O95104 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 PGM5P4-201ENST00000421970 445 ntBASIC16.03■□□□□ 0.16
SCAF4O95104 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.03■□□□□ 0.16
SCAF4O95104 KRT18P5-201ENST00000436075 1291 ntBASIC16.03■□□□□ 0.16
SCAF4O95104 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAF4O95104 HTR7P1-202ENST00000624664 4411 ntBASIC16.03■□□□□ 0.16
SCAF4O95104 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAF4O95104 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SCAF4O95104 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.03■□□□□ 0.16
SCAF4O95104 AC004854.2-201ENST00000608450 1441 ntBASIC16.02■□□□□ 0.16
SCAF4O95104 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCAF4O95104 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SCAF4O95104 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.02■□□□□ 0.16
SCAF4O95104 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.02■□□□□ 0.16
SCAF4O95104 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
SCAF4O95104 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC16.02■□□□□ 0.16
SCAF4O95104 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.02■□□□□ 0.16
SCAF4O95104 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.02■□□□□ 0.16
SCAF4O95104 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.02■□□□□ 0.16
SCAF4O95104 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.02■□□□□ 0.16
SCAF4O95104 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.02■□□□□ 0.16
SCAF4O95104 AC138907.5-202ENST00000569484 235 ntBASIC16.02■□□□□ 0.16
SCAF4O95104 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SCAF4O95104 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SCAF4O95104 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SCAF4O95104 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCAF4O95104 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAF4O95104 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAF4O95104 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SCAF4O95104 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.02■□□□□ 0.15
SCAF4O95104 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SCAF4O95104 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.15
SCAF4O95104 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
SCAF4O95104 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCAF4O95104 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
SCAF4O95104 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms