Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM4O75871 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM4O75871 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM4O75871 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CEACAM4O75871 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM4O75871 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
CEACAM4O75871 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.89■□□□□ 0.45
CEACAM4O75871 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM4O75871 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.89■□□□□ 0.45
CEACAM4O75871 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.89■□□□□ 0.45
CEACAM4O75871 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.89■□□□□ 0.45
CEACAM4O75871 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.89■□□□□ 0.45
CEACAM4O75871 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.89■□□□□ 0.45
CEACAM4O75871 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.89■□□□□ 0.45
CEACAM4O75871 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CEACAM4O75871 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM4O75871 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.89■□□□□ 0.45
CEACAM4O75871 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CEACAM4O75871 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CEACAM4O75871 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.88■□□□□ 0.45
CEACAM4O75871 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.88■□□□□ 0.45
CEACAM4O75871 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.88■□□□□ 0.45
CEACAM4O75871 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.88■□□□□ 0.45
CEACAM4O75871 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.88■□□□□ 0.45
CEACAM4O75871 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.88■□□□□ 0.45
CEACAM4O75871 CA15P1-201ENST00000481698 905 ntBASIC17.88■□□□□ 0.45
CEACAM4O75871 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.88■□□□□ 0.45
CEACAM4O75871 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CEACAM4O75871 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.88■□□□□ 0.45
CEACAM4O75871 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.88■□□□□ 0.45
CEACAM4O75871 AL353719.1-201ENST00000566847 864 ntBASIC17.88■□□□□ 0.45
CEACAM4O75871 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CEACAM4O75871 AC141257.4-201ENST00000634557 245 ntBASIC17.88■□□□□ 0.45
CEACAM4O75871 AC136944.6-201ENST00000634818 245 ntBASIC17.88■□□□□ 0.45
CEACAM4O75871 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.88■□□□□ 0.45
CEACAM4O75871 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.88■□□□□ 0.45
CEACAM4O75871 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.88■□□□□ 0.45
CEACAM4O75871 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CEACAM4O75871 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CEACAM4O75871 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.87■□□□□ 0.45
CEACAM4O75871 BX119927.1-201ENST00000636596 1552 ntBASIC17.87■□□□□ 0.45
CEACAM4O75871 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.87■□□□□ 0.45
CEACAM4O75871 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CEACAM4O75871 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.87■□□□□ 0.45
CEACAM4O75871 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.87■□□□□ 0.45
CEACAM4O75871 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.87■□□□□ 0.45
CEACAM4O75871 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 UPK3BP1-201ENST00000428678 509 ntBASIC17.87■□□□□ 0.45
CEACAM4O75871 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.87■□□□□ 0.45
CEACAM4O75871 AL160286.2-201ENST00000567150 934 ntBASIC17.87■□□□□ 0.45
CEACAM4O75871 AL512604.3-201ENST00000569583 964 ntBASIC17.87■□□□□ 0.45
CEACAM4O75871 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.87■□□□□ 0.45
CEACAM4O75871 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.87■□□□□ 0.45
CEACAM4O75871 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CEACAM4O75871 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.87■□□□□ 0.45
CEACAM4O75871 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CEACAM4O75871 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.86■□□□□ 0.45
CEACAM4O75871 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CEACAM4O75871 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.86■□□□□ 0.45
CEACAM4O75871 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.86■□□□□ 0.45
CEACAM4O75871 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 AC133561.1-201ENST00000568600 2415 ntBASIC17.86■□□□□ 0.45
CEACAM4O75871 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.86■□□□□ 0.45
CEACAM4O75871 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CEACAM4O75871 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CEACAM4O75871 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.86■□□□□ 0.45
CEACAM4O75871 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.86■□□□□ 0.45
CEACAM4O75871 SMG8-203ENST00000578922 2178 ntBASIC17.86■□□□□ 0.45
CEACAM4O75871 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.86■□□□□ 0.45
CEACAM4O75871 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CEACAM4O75871 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CEACAM4O75871 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CEACAM4O75871 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms