Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ZNF253O75346 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.25■□□□□ 0.03
ZNF253O75346 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF253O75346 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 AC005332.7-201ENST00000614046 2005 ntBASIC15.25■□□□□ 0.03
ZNF253O75346 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 AC125437.2-201ENST00000625180 2167 ntBASIC15.25■□□□□ 0.03
ZNF253O75346 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF253O75346 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ZNF253O75346 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC15.25■□□□□ 0.03
ZNF253O75346 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.25■□□□□ 0.03
ZNF253O75346 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ZNF253O75346 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ZNF253O75346 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ZNF253O75346 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
ZNF253O75346 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
ZNF253O75346 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.24■□□□□ 0.03
ZNF253O75346 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 KRT18P14-201ENST00000534205 1250 ntBASIC15.24■□□□□ 0.03
ZNF253O75346 AL356652.1-201ENST00000615962 565 ntBASIC15.24■□□□□ 0.03
ZNF253O75346 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.24■□□□□ 0.03
ZNF253O75346 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 AC004854.2-201ENST00000608450 1441 ntBASIC15.24■□□□□ 0.03
ZNF253O75346 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC15.24■□□□□ 0.03
ZNF253O75346 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 AL691432.2-201ENST00000607222 2038 ntBASIC15.24■□□□□ 0.03
ZNF253O75346 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ZNF253O75346 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
ZNF253O75346 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF253O75346 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF253O75346 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF253O75346 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF253O75346 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF253O75346 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.23■□□□□ 0.03
ZNF253O75346 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.23■□□□□ 0.03
ZNF253O75346 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.23■□□□□ 0.03
ZNF253O75346 AL162412.1-201ENST00000567129 965 ntBASIC15.23■□□□□ 0.03
ZNF253O75346 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.23■□□□□ 0.03
ZNF253O75346 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ZNF253O75346 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms