Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL41O60662 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL41O60662 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KLHL41O60662 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 AC091799.1-201ENST00000422823 811 ntBASIC19.43■□□□□ 0.7
KLHL41O60662 POU5F1P3-201ENST00000428824 1078 ntBASIC19.43■□□□□ 0.7
KLHL41O60662 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL41O60662 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.43■□□□□ 0.7
KLHL41O60662 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL41O60662 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL41O60662 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.43■□□□□ 0.7
KLHL41O60662 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.43■□□□□ 0.7
KLHL41O60662 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KLHL41O60662 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
KLHL41O60662 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL41O60662 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KLHL41O60662 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.43■□□□□ 0.7
KLHL41O60662 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
KLHL41O60662 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL41O60662 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 AC007322.3-201ENST00000426526 701 ntBASIC19.42■□□□□ 0.7
KLHL41O60662 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.42■□□□□ 0.7
KLHL41O60662 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.42■□□□□ 0.7
KLHL41O60662 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.42■□□□□ 0.7
KLHL41O60662 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.42■□□□□ 0.7
KLHL41O60662 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
KLHL41O60662 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.42■□□□□ 0.7
KLHL41O60662 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KLHL41O60662 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC19.42■□□□□ 0.7
KLHL41O60662 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 Z82202.1-201ENST00000623446 1880 ntBASIC19.41■□□□□ 0.7
KLHL41O60662 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
KLHL41O60662 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.41■□□□□ 0.7
KLHL41O60662 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.41■□□□□ 0.7
KLHL41O60662 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
KLHL41O60662 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
KLHL41O60662 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
KLHL41O60662 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.41■□□□□ 0.7
KLHL41O60662 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
KLHL41O60662 KRT18P29-201ENST00000397031 1267 ntBASIC19.41■□□□□ 0.7
KLHL41O60662 BX276092.2-201ENST00000417668 665 ntBASIC19.41■□□□□ 0.7
KLHL41O60662 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.41■□□□□ 0.7
KLHL41O60662 RNA5SP413-201ENST00000516373 109 ntBASIC19.41■□□□□ 0.7
KLHL41O60662 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.41■□□□□ 0.7
KLHL41O60662 ITM2C-210ENST00000620962 501 ntBASIC19.41■□□□□ 0.7
KLHL41O60662 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 RBM17P2-201ENST00000616397 1405 ntBASIC19.41■□□□□ 0.7
KLHL41O60662 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.41■□□□□ 0.7
KLHL41O60662 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KLHL41O60662 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.4■□□□□ 0.7
KLHL41O60662 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.4■□□□□ 0.7
KLHL41O60662 AC093503.3-201ENST00000624917 2352 ntBASIC19.4■□□□□ 0.7
KLHL41O60662 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.4■□□□□ 0.7
KLHL41O60662 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.4■□□□□ 0.7
KLHL41O60662 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.4■□□□□ 0.7
KLHL41O60662 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 AC016405.3-201ENST00000607710 860 ntBASIC19.4■□□□□ 0.7
KLHL41O60662 FAM21FP-204ENST00000608637 956 ntBASIC19.4■□□□□ 0.7
KLHL41O60662 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
KLHL41O60662 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
KLHL41O60662 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
KLHL41O60662 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms