Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
VEGFDO43915 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VEGFDO43915 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VEGFDO43915 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
VEGFDO43915 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VEGFDO43915 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
VEGFDO43915 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.3■□□□□ 0.68
VEGFDO43915 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.3■□□□□ 0.68
VEGFDO43915 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.3■□□□□ 0.68
VEGFDO43915 Z99916.2-201ENST00000604037 246 ntBASIC19.3■□□□□ 0.68
VEGFDO43915 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 KRT8P8-201ENST00000434750 1448 ntBASIC19.3■□□□□ 0.68
VEGFDO43915 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.3■□□□□ 0.68
VEGFDO43915 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.3■□□□□ 0.68
VEGFDO43915 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.3■□□□□ 0.68
VEGFDO43915 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.3■□□□□ 0.68
VEGFDO43915 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VEGFDO43915 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
VEGFDO43915 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.29■□□□□ 0.68
VEGFDO43915 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.29■□□□□ 0.68
VEGFDO43915 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VEGFDO43915 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VEGFDO43915 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VEGFDO43915 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VEGFDO43915 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.29■□□□□ 0.68
VEGFDO43915 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VEGFDO43915 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VEGFDO43915 AP002982.1-201ENST00000492365 877 ntBASIC19.29■□□□□ 0.68
VEGFDO43915 AF186192.3-201ENST00000583427 947 ntBASIC19.29■□□□□ 0.68
VEGFDO43915 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.29■□□□□ 0.68
VEGFDO43915 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VEGFDO43915 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.29■□□□□ 0.68
VEGFDO43915 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.29■□□□□ 0.68
VEGFDO43915 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
VEGFDO43915 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.28■□□□□ 0.68
VEGFDO43915 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VEGFDO43915 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.28■□□□□ 0.68
VEGFDO43915 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
VEGFDO43915 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.28■□□□□ 0.68
VEGFDO43915 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.28■□□□□ 0.68
VEGFDO43915 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.28■□□□□ 0.68
VEGFDO43915 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VEGFDO43915 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
VEGFDO43915 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VEGFDO43915 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VEGFDO43915 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
VEGFDO43915 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
VEGFDO43915 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
VEGFDO43915 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
VEGFDO43915 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VEGFDO43915 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
VEGFDO43915 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.27■□□□□ 0.68
VEGFDO43915 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.27■□□□□ 0.68
VEGFDO43915 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
VEGFDO43915 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VEGFDO43915 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.27■□□□□ 0.68
VEGFDO43915 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VEGFDO43915 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.27■□□□□ 0.68
VEGFDO43915 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.27■□□□□ 0.68
VEGFDO43915 AL049637.2-201ENST00000641778 930 ntBASIC19.27■□□□□ 0.68
VEGFDO43915 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VEGFDO43915 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.27■□□□□ 0.68
VEGFDO43915 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VEGFDO43915 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VEGFDO43915 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VEGFDO43915 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.27■□□□□ 0.67
VEGFDO43915 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
VEGFDO43915 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
VEGFDO43915 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VEGFDO43915 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.26■□□□□ 0.67
VEGFDO43915 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms