Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 AC004264.1-201ENST00000608354 794 ntBASIC18.89■□□□□ 0.61
PRICKLE3O43900 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PRICKLE3O43900 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PRICKLE3O43900 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 AC125437.2-201ENST00000625180 2167 ntBASIC18.88■□□□□ 0.61
PRICKLE3O43900 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PRICKLE3O43900 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.88■□□□□ 0.61
PRICKLE3O43900 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 TUBB8P6-201ENST00000436895 1288 ntBASIC18.87■□□□□ 0.61
PRICKLE3O43900 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 RARRES2P10-201ENST00000564312 460 ntBASIC18.87■□□□□ 0.61
PRICKLE3O43900 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PRICKLE3O43900 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PRICKLE3O43900 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 C1QL1P1-201ENST00000568105 661 ntBASIC18.86■□□□□ 0.61
PRICKLE3O43900 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PRICKLE3O43900 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.86■□□□□ 0.61
PRICKLE3O43900 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms