Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.94■□□□□ 0.3
PHF1O43189 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PHF1O43189 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PHF1O43189 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
PHF1O43189 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.93■□□□□ 0.3
PHF1O43189 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PHF1O43189 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.93■□□□□ 0.3
PHF1O43189 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PHF1O43189 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.93■□□□□ 0.3
PHF1O43189 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC16.93■□□□□ 0.3
PHF1O43189 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PHF1O43189 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF1O43189 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF1O43189 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PHF1O43189 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 AC092720.2-201ENST00000602388 1665 ntBASIC16.92■□□□□ 0.3
PHF1O43189 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF1O43189 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PHF1O43189 PGM5P4-201ENST00000421970 445 ntBASIC16.92■□□□□ 0.3
PHF1O43189 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PHF1O43189 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.92■□□□□ 0.3
PHF1O43189 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF1O43189 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.92■□□□□ 0.3
PHF1O43189 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.92■□□□□ 0.3
PHF1O43189 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.92■□□□□ 0.3
PHF1O43189 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PHF1O43189 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PHF1O43189 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PHF1O43189 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF1O43189 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF1O43189 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF1O43189 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF1O43189 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF1O43189 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.91■□□□□ 0.3
PHF1O43189 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PHF1O43189 KRT17P3-201ENST00000420566 1262 ntBASIC16.91■□□□□ 0.3
PHF1O43189 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.91■□□□□ 0.3
PHF1O43189 AC060766.5-201ENST00000590539 871 ntBASIC16.91■□□□□ 0.3
PHF1O43189 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PHF1O43189 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.91■□□□□ 0.3
PHF1O43189 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF1O43189 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.91■□□□□ 0.3
PHF1O43189 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.91■□□□□ 0.3
PHF1O43189 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PHF1O43189 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PHF1O43189 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.9■□□□□ 0.3
PHF1O43189 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PHF1O43189 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.9■□□□□ 0.3
PHF1O43189 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PHF1O43189 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PHF1O43189 SMG8-203ENST00000578922 2178 ntBASIC16.9■□□□□ 0.3
PHF1O43189 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PHF1O43189 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms