Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 AP001412.1-201ENST00000608405 714 ntBASIC21.05■□□□□ 0.96
SPTLC1O15269 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SPTLC1O15269 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SPTLC1O15269 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
SPTLC1O15269 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC21.04■□□□□ 0.96
SPTLC1O15269 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC21.04■□□□□ 0.96
SPTLC1O15269 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC21.04■□□□□ 0.96
SPTLC1O15269 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
SPTLC1O15269 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SPTLC1O15269 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 FAM197Y1-201ENST00000421178 764 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.04■□□□□ 0.96
SPTLC1O15269 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.04■□□□□ 0.96
SPTLC1O15269 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.04■□□□□ 0.96
SPTLC1O15269 C1QL1P1-201ENST00000568105 661 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 CD177P1-201ENST00000606252 935 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 AL353708.3-201ENST00000610272 989 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 AP001271.2-201ENST00000624018 1556 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SPTLC1O15269 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.04■□□□□ 0.96
SPTLC1O15269 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SPTLC1O15269 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 GOLGA2P11-201ENST00000562660 1621 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SPTLC1O15269 KRT17P2-201ENST00000300992 1314 ntBASIC21.04■□□□□ 0.96
SPTLC1O15269 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SPTLC1O15269 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC1O15269 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SPTLC1O15269 AL353807.1-201ENST00000427475 662 ntBASIC21.03■□□□□ 0.96
SPTLC1O15269 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC1O15269 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC21.03■□□□□ 0.96
SPTLC1O15269 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.03■□□□□ 0.96
SPTLC1O15269 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC1O15269 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SPTLC1O15269 AC073195.1-201ENST00000607241 877 ntBASIC21.03■□□□□ 0.96
SPTLC1O15269 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 TCF3P1-201ENST00000423021 1937 ntBASIC21.03■□□□□ 0.96
SPTLC1O15269 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.03■□□□□ 0.96
SPTLC1O15269 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SPTLC1O15269 TMEM179-206ENST00000616017 1645 ntBASIC21.03■□□□□ 0.96
SPTLC1O15269 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.03■□□□□ 0.96
SPTLC1O15269 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SPTLC1O15269 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC1O15269 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.03■□□□□ 0.96
SPTLC1O15269 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
SPTLC1O15269 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
SPTLC1O15269 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SPTLC1O15269 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
SPTLC1O15269 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.02■□□□□ 0.96
SPTLC1O15269 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
SPTLC1O15269 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC1O15269 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC1O15269 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC1O15269 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.02■□□□□ 0.96
SPTLC1O15269 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC1O15269 AP002982.1-201ENST00000492365 877 ntBASIC21.02■□□□□ 0.96
SPTLC1O15269 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.02■□□□□ 0.96
SPTLC1O15269 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SPTLC1O15269 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SPTLC1O15269 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SPTLC1O15269 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.02■□□□□ 0.95
SPTLC1O15269 LINC01521-201ENST00000504184 1943 ntBASIC21.02■□□□□ 0.95
SPTLC1O15269 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC1O15269 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC21.01■□□□□ 0.95
SPTLC1O15269 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC1O15269 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC1O15269 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC1O15269 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC1O15269 NIFKP9-201ENST00000419265 221 ntBASIC21.01■□□□□ 0.95
SPTLC1O15269 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.01■□□□□ 0.95
SPTLC1O15269 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.01■□□□□ 0.95
SPTLC1O15269 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SPTLC1O15269 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
SPTLC1O15269 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC1O15269 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SPTLC1O15269 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SPTLC1O15269 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.01■□□□□ 0.95
SPTLC1O15269 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SPTLC1O15269 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.01■□□□□ 0.95
SPTLC1O15269 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.01■□□□□ 0.95
SPTLC1O15269 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms