Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 KRT18P16-201ENST00000510337 1294 ntBASIC17.4■□□□□ 0.38
NPIPB4C9JG80 UNC93B5-201ENST00000530315 699 ntBASIC17.4■□□□□ 0.38
NPIPB4C9JG80 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NPIPB4C9JG80 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
NPIPB4C9JG80 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NPIPB4C9JG80 KRT8P8-201ENST00000434750 1448 ntBASIC17.39■□□□□ 0.38
NPIPB4C9JG80 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.39■□□□□ 0.38
NPIPB4C9JG80 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 ID1-201ENST00000376105 1233 ntBASIC17.39■□□□□ 0.37
NPIPB4C9JG80 AL355802.2-201ENST00000402069 882 ntBASIC17.39■□□□□ 0.37
NPIPB4C9JG80 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 POM121L13P-201ENST00000422362 380 ntBASIC17.39■□□□□ 0.37
NPIPB4C9JG80 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
NPIPB4C9JG80 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 ZNF815P-204ENST00000434898 1737 ntBASIC17.38■□□□□ 0.37
NPIPB4C9JG80 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.38■□□□□ 0.37
NPIPB4C9JG80 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 AL032819.2-201ENST00000624543 2162 ntBASIC17.37■□□□□ 0.37
NPIPB4C9JG80 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPIPB4C9JG80 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.36■□□□□ 0.37
NPIPB4C9JG80 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms