Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 YBX1P10-201ENST00000444752 975 ntBASIC18.69■□□□□ 0.58
LRIT2A6NDA9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 AC128676.1-201ENST00000454392 318 ntBASIC18.69■□□□□ 0.58
LRIT2A6NDA9 FAM201B-201ENST00000458407 597 ntBASIC18.69■□□□□ 0.58
LRIT2A6NDA9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.69■□□□□ 0.58
LRIT2A6NDA9 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
LRIT2A6NDA9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
LRIT2A6NDA9 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 RN7SL471P-201ENST00000580476 299 ntBASIC18.67■□□□□ 0.58
LRIT2A6NDA9 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRIT2A6NDA9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 AL023875.1-201ENST00000640777 796 ntBASIC18.66■□□□□ 0.58
LRIT2A6NDA9 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRIT2A6NDA9 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 ITM2C-210ENST00000620962 501 ntBASIC18.65■□□□□ 0.58
LRIT2A6NDA9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRIT2A6NDA9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms