Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AP006587.1-201ENST00000534129 1502 ntBASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBV7-1A0A0A6YYK4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 TREX1-205ENST00000625293 1783 ntBASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 RNA5SP413-201ENST00000516373 109 ntBASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC124283.5-201ENST00000624661 1809 ntBASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBV7-1A0A0A6YYK4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 POM121L13P-201ENST00000422362 380 ntBASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 YBX1P10-201ENST00000444752 975 ntBASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 PRKY-204ENST00000533551 1019 ntBASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 PNN-205ENST00000556530 601 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBV7-1A0A0A6YYK4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms