Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 OR7E25P-202ENST00000641088 5937 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 TMEM68-201ENST00000334667 2401 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 RNF214-204ENST00000530849 2846 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC009166.2-201ENST00000624410 2833 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 FAM120B-203ENST00000537664 3212 ntAPPRIS ALT2 TSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 DLEU1-212ENST00000469754 2955 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 LINC01139-201ENST00000400946 1537 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 RN7SKP239-201ENST00000364814 295 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 SNORA70G-201ENST00000383923 142 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC087752.1-201ENST00000391360 558 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AL592114.1-201ENST00000403842 483 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 TRBV30-201ENST00000417977 447 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 RBMY2QP-201ENST00000429799 1147 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 SUMO1P3-201ENST00000439961 304 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 ARL2BPP7-201ENST00000446421 490 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC022400.2-201ENST00000446730 866 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC069213.3-201ENST00000454858 474 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC007547.1-201ENST00000462177 490 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 SNCA-211ENST00000508895 905 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 GAPDHP44-201ENST00000513513 1007 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 RNU6-1271P-201ENST00000517049 105 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 RNU6-1137P-201ENST00000517073 99 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC022616.6-201ENST00000520479 119 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 LINC00678-201ENST00000527083 786 ntTSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AP001994.1-201ENST00000527539 826 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 RAB30-209ENST00000532548 644 ntTSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 CHURC1-202ENST00000548752 439 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 BNIP3P6-201ENST00000549284 499 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AL162632.2-201ENST00000553933 399 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 UBE2CP4-201ENST00000561405 535 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 SAXO2-204ENST00000565432 811 ntAPPRIS ALT2 TSL 4 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC060766.2-201ENST00000588235 334 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 CYP2C61P-201ENST00000604072 290 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AP001521.1-201ENST00000609150 300 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 SNCA-212ENST00000611107 297 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 uc_338.22-201ENST00000622722 187 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AL356095.2-201ENST00000624025 457 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC010149.2-201ENST00000637608 315 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 ZMYND8-219ENST00000611941 5090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 CDY15P-201ENST00000421995 1570 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 CDY22P-201ENST00000451423 1554 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 SAMD8-201ENST00000372687 6935 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 LINC00934-202ENST00000630357 2291 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 SERPINA9-203ENST00000380365 1333 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 MTF2-201ENST00000370298 4125 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.49□□□□□ -1.21
USB1Q9BQ65 MCTP1-205ENST00000505208 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC012618.3-205ENST00000637896 1496 ntBASIC7.49□□□□□ -1.21
USB1Q9BQ65 AC090017.1-201ENST00000548612 1779 ntBASIC7.48□□□□□ -1.21
USB1Q9BQ65 ZNF207-202ENST00000342555 1905 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.48□□□□□ -1.21
USB1Q9BQ65 ARMCX5-GPRASP2-206ENST00000476910 1848 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 NOL4-201ENST00000261592 3957 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
USB1Q9BQ65 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms