Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC8.82□□□□□ -1
IFT140Q96RY7 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC8.82□□□□□ -1
IFT140Q96RY7 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC8.82□□□□□ -1
IFT140Q96RY7 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 RNGTTP1-201ENST00000420965 728 ntBASIC8.82□□□□□ -1
IFT140Q96RY7 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC8.82□□□□□ -1
IFT140Q96RY7 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC8.82□□□□□ -1
IFT140Q96RY7 RNA5SP43-201ENST00000516559 110 ntBASIC8.82□□□□□ -1
IFT140Q96RY7 AC009643.1-201ENST00000532030 391 ntBASIC8.82□□□□□ -1
IFT140Q96RY7 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
IFT140Q96RY7 AP005131.7-201ENST00000610087 611 ntBASIC8.82□□□□□ -1
IFT140Q96RY7 AC068724.3-201ENST00000625906 87 ntBASIC8.82□□□□□ -1
IFT140Q96RY7 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC8.82□□□□□ -1
IFT140Q96RY7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC8.82□□□□□ -1
IFT140Q96RY7 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC8.81□□□□□ -1
IFT140Q96RY7 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
IFT140Q96RY7 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 UG0898H09-202ENST00000623646 7040 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC8.81□□□□□ -1
IFT140Q96RY7 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.81□□□□□ -1
IFT140Q96RY7 TTC3P1-201ENST00000399586 6081 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 HSPD1P7-201ENST00000447985 1686 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 EPS8-213ENST00000543612 2965 ntAPPRIS P1 TSL 2 BASIC8.81□□□□□ -1
IFT140Q96RY7 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
IFT140Q96RY7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC8.81□□□□□ -1
IFT140Q96RY7 AC096921.1-201ENST00000411661 375 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AL353626.3-201ENST00000413399 657 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AC004074.1-201ENST00000421810 1063 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AC073410.1-201ENST00000435125 589 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AC011005.3-201ENST00000491624 395 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 GAPDHP56-201ENST00000506031 988 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AC111000.3-201ENST00000508057 576 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AC093824.1-201ENST00000508796 343 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC8.81□□□□□ -1
IFT140Q96RY7 BNIP3P5-201ENST00000562290 498 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AL512782.1-201ENST00000603093 364 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 AL445423.1-201ENST00000609941 536 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 MTCO1P1-201ENST00000624263 1081 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 AC099654.6-201ENST00000636487 512 ntBASIC8.81□□□□□ -1
IFT140Q96RY7 FTO-223ENST00000640179 210 ntTSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
IFT140Q96RY7 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
IFT140Q96RY7 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC8.81□□□□□ -1
IFT140Q96RY7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC8.81□□□□□ -1
IFT140Q96RY7 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
IFT140Q96RY7 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
IFT140Q96RY7 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
IFT140Q96RY7 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
IFT140Q96RY7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC8.8□□□□□ -1
IFT140Q96RY7 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC8.8□□□□□ -1
IFT140Q96RY7 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC8.8□□□□□ -1
IFT140Q96RY7 SAMM50P1-201ENST00000455403 1399 ntBASIC8.8□□□□□ -1
IFT140Q96RY7 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
IFT140Q96RY7 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC8.8□□□□□ -1
IFT140Q96RY7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.8□□□□□ -1
IFT140Q96RY7 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC8.8□□□□□ -1
IFT140Q96RY7 OR52J1P-201ENST00000450596 932 ntBASIC8.8□□□□□ -1
IFT140Q96RY7 SLC25A15P5-201ENST00000508033 253 ntBASIC8.8□□□□□ -1
IFT140Q96RY7 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC8.8□□□□□ -1
IFT140Q96RY7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC8.8□□□□□ -1
IFT140Q96RY7 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.8□□□□□ -1
IFT140Q96RY7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC8.8□□□□□ -1
IFT140Q96RY7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC8.8□□□□□ -1
IFT140Q96RY7 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
IFT140Q96RY7 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC8.8□□□□□ -1
IFT140Q96RY7 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC8.8□□□□□ -1
IFT140Q96RY7 AC092821.2-201ENST00000545710 2042 ntBASIC8.8□□□□□ -1
IFT140Q96RY7 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.8□□□□□ -1
IFT140Q96RY7 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC8.79□□□□□ -1
IFT140Q96RY7 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
IFT140Q96RY7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
IFT140Q96RY7 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.79□□□□□ -1
IFT140Q96RY7 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
IFT140Q96RY7 NBPF8-201ENST00000583271 5330 ntBASIC8.79□□□□□ -1
IFT140Q96RY7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC8.79□□□□□ -1
IFT140Q96RY7 PCBP1-AS1-230ENST00000439670 2180 ntTSL 2 BASIC8.79□□□□□ -1
IFT140Q96RY7 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
IFT140Q96RY7 PARN-201ENST00000341484 2100 ntTSL 2 BASIC8.79□□□□□ -1
IFT140Q96RY7 RSU1P1-201ENST00000453416 441 ntBASIC8.79□□□□□ -1
IFT140Q96RY7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.79□□□□□ -1
IFT140Q96RY7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.79□□□□□ -1
IFT140Q96RY7 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms