Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC095052.1-201ENST00000509955 863 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 ZNF519P4-201ENST00000514008 125 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC009120.3-201ENST00000563335 499 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC091057.3-201ENST00000602684 733 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 RPSAP75-201ENST00000605848 301 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC099654.9-201ENST00000637055 678 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 OR7E91P-202ENST00000642062 1198 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
VPS50Q96JG6 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC093849.1-201ENST00000563631 2209 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
VPS50Q96JG6 AC092692.1-201ENST00000623625 2595 ntBASIC5.95□□□□□ -1.46
VPS50Q96JG6 MRRFP1-201ENST00000435941 1675 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AL136984.1-201ENST00000607611 1893 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC093225.1-201ENST00000506867 1408 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 GCNT1P4-201ENST00000404096 329 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 RNA5SP431-201ENST00000410312 120 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 RANP4-201ENST00000413361 655 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 RPS7P8-201ENST00000418311 581 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AL365220.1-201ENST00000432923 399 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 FTLP19-201ENST00000433300 394 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 OFD1P3Y-201ENST00000453312 783 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 RPS27AP3-201ENST00000453803 454 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC068228.1-201ENST00000461723 211 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 NPM1P17-201ENST00000479221 602 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 AP002884.1-201ENST00000479691 655 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC093719.1-201ENST00000480427 441 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 RPL12P30-201ENST00000488389 499 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 SNX18P24-201ENST00000505249 671 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 RNA5SP400-201ENST00000517155 111 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 MIR8084-201ENST00000614105 89 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 MIR7159-201ENST00000620587 66 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC022400.9-201ENST00000623633 273 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.94□□□□□ -1.46
VPS50Q96JG6 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS50Q96JG6 AC144833.1-201ENST00000567953 4089 ntBASIC5.94□□□□□ -1.46
VPS50Q96JG6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 IFIT1P1-201ENST00000400497 1449 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS50Q96JG6 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL121977.1-201ENST00000401636 979 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 SNORA11.3-201ENST00000408471 128 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 RNU2-22P-201ENST00000411266 212 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL354707.3-201ENST00000427308 331 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 MTCO1P51-201ENST00000427672 1060 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC112492.2-201ENST00000432774 1030 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 PTP4A1P3-201ENST00000433661 420 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AC094019.1-201ENST00000434678 472 ntBASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS50Q96JG6 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms