Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
ERCC4Q92889 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.84□□□□□ -1.32
ERCC4Q92889 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.84□□□□□ -1.32
ERCC4Q92889 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.32
ERCC4Q92889 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
ERCC4Q92889 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.84□□□□□ -1.32
ERCC4Q92889 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC025470.1-201ENST00000510053 2032 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ERCC4Q92889 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 RNA5SP485-201ENST00000365053 119 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 RNY3P9-201ENST00000384727 106 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 MIR191-201ENST00000384873 92 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ERCC4Q92889 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 HMGB3P19-201ENST00000403971 560 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 RN7SKP146-201ENST00000410242 334 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 RMRPP5-201ENST00000411156 267 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 TEX41-203ENST00000420472 765 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC005005.2-201ENST00000420779 380 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 PTP4A1P7-201ENST00000423476 514 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 RPL12P28-201ENST00000430852 489 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 PTP4A1P3-201ENST00000433661 420 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AL162739.1-201ENST00000450606 307 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC096992.1-201ENST00000459808 709 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 EIF1P7-201ENST00000487533 337 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
ERCC4Q92889 SUMO2P5-201ENST00000506790 245 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC112518.2-201ENST00000508565 425 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC105313.1-201ENST00000509121 353 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 TOMM22P4-201ENST00000511318 336 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.83□□□□□ -1.32
ERCC4Q92889 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC023825.1-201ENST00000566704 1030 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 MIR3157-201ENST00000578688 85 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.83□□□□□ -1.32
ERCC4Q92889 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC008751.2-201ENST00000597885 980 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 DUXAP3-201ENST00000603616 594 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 AL356752.1-201ENST00000615844 593 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 AL122023.1-201ENST00000622847 530 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
ERCC4Q92889 AC217777.1-201ENST00000570034 1471 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 OR10AB1P-202ENST00000641219 1686 ntBASIC6.83□□□□□ -1.32
ERCC4Q92889 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
ERCC4Q92889 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.82□□□□□ -1.32
ERCC4Q92889 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 RNA5SP110-201ENST00000362638 115 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 SNORA64.3-201ENST00000365647 134 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
ERCC4Q92889 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
ERCC4Q92889 PEX12P1-201ENST00000400284 1048 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 AL355615.1-201ENST00000406187 641 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 AC092648.1-201ENST00000425870 423 ntBASIC6.82□□□□□ -1.32
ERCC4Q92889 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC6.82□□□□□ -1.32
ERCC4Q92889 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.82□□□□□ -1.32
ERCC4Q92889 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.82□□□□□ -1.32
ERCC4Q92889 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC6.82□□□□□ -1.32
ERCC4Q92889 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
ERCC4Q92889 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms