Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RN7SKP29-201ENST00000410957 272 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 Z84478.1-201ENST00000438230 1219 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 RNF2P1-201ENST00000442955 1010 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 RPS23P6-201ENST00000466136 431 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC021087.2-201ENST00000504656 1203 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 SNORA43.3-201ENST00000517240 103 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC073581.1-201ENST00000519036 575 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AP005639.1-201ENST00000526939 192 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 SUMO2P15-201ENST00000604285 278 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AL139099.4-201ENST00000614802 114 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 MIR1264-201ENST00000616374 69 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC016957.2-201ENST00000616998 848 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AL445670.1-201ENST00000618889 801 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AP001885.1-201ENST00000621658 558 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AP000943.4-201ENST00000622912 357 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AL022323.4-201ENST00000623980 13120 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 MTND4P9-201ENST00000507819 1346 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HMGB4Q8WW32 AC137056.2-201ENST00000624055 1958 ntBASIC5.95□□□□□ -1.46
HMGB4Q8WW32 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC005261.2-201ENST00000593427 4258 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 SNORA64.1-201ENST00000362600 132 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 RNA5SP333-201ENST00000363466 118 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 RNA5SP334-201ENST00000364825 118 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 NPM1P4-201ENST00000414095 812 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 RPS4XP5-201ENST00000419038 768 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC099677.3-201ENST00000427081 395 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AL163193.1-201ENST00000444895 788 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC022215.1-201ENST00000481770 362 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 OR7E157P-201ENST00000494376 911 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 MTATP6P9-201ENST00000515039 680 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC008429.4-201ENST00000521201 182 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 TPM3P3-201ENST00000521343 354 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC093014.1-201ENST00000548926 724 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 TXNP4-201ENST00000575018 310 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 MIR4301-201ENST00000577203 66 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC119403.2-201ENST00000590960 598 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 BMS1P7-201ENST00000602440 1052 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 MTATP6P2-201ENST00000603319 678 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AL021707.7-201ENST00000607991 416 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AL391834.2-201ENST00000609982 546 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC069234.4-201ENST00000621276 412 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC095038.2-201ENST00000621464 1070 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 OR11H2-202ENST00000641517 1085 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC012078.1-201ENST00000405035 1646 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 AP000547.3-204ENST00000588548 2523 ntBASIC5.94□□□□□ -1.46
HMGB4Q8WW32 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.94□□□□□ -1.46
HMGB4Q8WW32 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC119674.1-213ENST00000641177 1386 ntBASIC5.93□□□□□ -1.46
HMGB4Q8WW32 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HMGB4Q8WW32 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms