Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 WBP11P1-201ENST00000562560 1931 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 BX284613.1-201ENST00000452221 1641 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 SNORD56.6-201ENST00000384569 71 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 RN7SKP27-201ENST00000410684 333 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 AC006967.1-201ENST00000467608 589 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 RNA5SP43-201ENST00000516559 110 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 OR7E128P-201ENST00000532736 1024 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 AC007114.2-201ENST00000576014 4281 ntBASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 SLC7A2-201ENST00000004531 7560 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
COL22A1Q8NFW1 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 AC114774.1-201ENST00000507410 1770 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 BZW1-203ENST00000409600 6875 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 RNU1-59P-201ENST00000364829 162 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 AC004975.1-201ENST00000428733 208 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 IGKV2D-10-201ENST00000520194 281 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 U1.25-201ENST00000614085 162 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 U1.34-201ENST00000618578 162 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 U1.31-201ENST00000620022 160 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 AC091932.2-201ENST00000623014 291 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 AC006058.1-201ENST00000568686 5067 ntBASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL22A1Q8NFW1 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 RPS3AP23-201ENST00000401762 784 ntBASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 MIR1254-2-201ENST00000579553 63 ntBASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AL512782.1-201ENST00000603093 364 ntBASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AC068724.3-201ENST00000625906 87 ntBASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 AC099654.6-201ENST00000636487 512 ntBASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 ZNF840P-201ENST00000504759 1996 ntBASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC7.1□□□□□ -1.27
COL22A1Q8NFW1 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 RPL10P17-201ENST00000453852 316 ntBASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 RN7SKP260-201ENST00000516907 149 ntBASIC7.09□□□□□ -1.27
COL22A1Q8NFW1 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms