Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 AC005034.3-201ENST00000604845 1747 ntBASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC7.21□□□□□ -1.26
SMC1BQ8NDV3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AP005139.1-201ENST00000580702 1647 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 FBXO43-201ENST00000428847 2886 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 RNU6-792P-201ENST00000363490 107 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 U8.4-201ENST00000363626 134 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 Z99127.2-201ENST00000441426 334 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 TPT1P13-201ENST00000449760 499 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 RPS4XP1-201ENST00000482189 787 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC114728.1-201ENST00000488289 483 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC072052.1-201ENST00000496556 306 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC091965.3-201ENST00000506236 208 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 HMGB1P46-201ENST00000520062 610 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AP004607.2-201ENST00000533949 322 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 OR1F2P-201ENST00000570470 933 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC015849.2-201ENST00000605738 409 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC004775.1-201ENST00000607389 753 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC096861.1-201ENST00000616652 240 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC068880.4-201ENST00000623082 495 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC011455.2-201ENST00000599320 3336 ntBASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
SMC1BQ8NDV3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC017002.4-201ENST00000604721 1525 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC096537.2-201ENST00000413707 714 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 RPL26P29-201ENST00000415623 438 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 MORF4L1P7-201ENST00000426038 703 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AL606490.7-201ENST00000433136 191 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 HMGB3P24-201ENST00000433260 622 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 RPS11P7-201ENST00000442125 465 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 RAB28P2-201ENST00000454299 641 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 RANP2-201ENST00000456833 229 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 OR7E157P-201ENST00000494376 911 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 NAMPTP2-201ENST00000505629 1115 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 PRELID3BP5-201ENST00000508612 460 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC026407.1-201ENST00000518369 204 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 C1DP5-201ENST00000525775 383 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 UBTFL9-201ENST00000534504 1148 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AL049779.2-201ENST00000553847 315 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC015720.2-201ENST00000567709 334 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC005242.1-201ENST00000585658 438 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 SUGT1P3-202ENST00000604259 383 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AL683813.2-201ENST00000605245 502 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AC013244.3-201ENST00000605614 388 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AL008723.3-201ENST00000608926 449 ntBASIC7.19□□□□□ -1.26
SMC1BQ8NDV3 AL021918.2-201ENST00000613415 194 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms