Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF37CP-201ENST00000406795 241 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SKP108-201ENST00000411367 328 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC092865.3-201ENST00000425390 1026 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 MTND6P12-201ENST00000428247 522 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AL450263.2-201ENST00000439400 589 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC092106.1-201ENST00000444291 373 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 GEMIN2P1-201ENST00000454246 752 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC098583.1-201ENST00000480875 255 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 HMGB3P14-201ENST00000494195 599 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC091917.2-201ENST00000505002 744 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SKP253-201ENST00000516424 309 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AP004607.5-201ENST00000532034 217 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 MIR4675-201ENST00000577898 77 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC127024.5-201ENST00000580085 462 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC012368.3-201ENST00000604190 219 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC091059.2-201ENST00000623355 614 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC104260.2-201ENST00000623551 3497 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
CCDC71LQ8N9Z2 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 QRSL1P1-201ENST00000400977 1540 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 RNA5SP110-201ENST00000362638 115 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 RN7SKP74-201ENST00000362849 309 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 PCNPP4-201ENST00000414817 517 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 MEAF6P1-201ENST00000416092 327 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC099782.1-201ENST00000425889 474 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC023141.3-201ENST00000436698 278 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC092601.1-201ENST00000444526 383 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 RPS7P10-201ENST00000464254 603 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 IGLV3-24-201ENST00000517477 197 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC025857.1-201ENST00000525252 377 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 SLC25A51P2-201ENST00000535708 889 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC096996.1-201ENST00000563813 325 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC106730.2-201ENST00000566641 540 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 MIR4311-201ENST00000580794 100 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 MIR4701-201ENST00000583094 63 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC008507.3-201ENST00000585753 472 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AC091932.2-201ENST00000623014 291 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 RNF19BPY-201ENST00000458209 1550 ntBASIC4.64□□□□□ -1.67
CCDC71LQ8N9Z2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms