Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 RN7SKP128-201ENST00000364270 303 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 RNA5SP211-201ENST00000365516 117 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 MTND4LP21-201ENST00000415303 295 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 RPS23P9-201ENST00000448848 438 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 SDC4P-201ENST00000453285 601 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 LSM3P4-201ENST00000502948 309 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 RNA5SP473-201ENST00000516402 125 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC084824.2-201ENST00000548906 345 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC107958.1-201ENST00000556576 290 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AP005119.1-201ENST00000580956 292 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC005244.1-201ENST00000582566 339 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AL021918.2-201ENST00000613415 194 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AL356752.1-201ENST00000615844 593 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AL445670.1-201ENST00000618889 801 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC025262.3-201ENST00000623666 360 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 MTND5P23-201ENST00000430812 1655 ntBASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
TMEM53Q6P2H8 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC120338.1-201ENST00000625074 1541 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 OR9K1P-201ENST00000326513 941 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 OR56A4-201ENST00000330728 1209 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 RNA5SP433-201ENST00000364491 114 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 RPL24P2-201ENST00000421023 475 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC012519.1-201ENST00000424588 610 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC009784.1-201ENST00000426484 460 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AL445928.1-201ENST00000435545 222 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 SNRPFP2-201ENST00000440710 251 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 RPS7P3-201ENST00000443360 580 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 RNU1-88P-201ENST00000459274 128 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AL603882.1-201ENST00000463059 681 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AP002884.1-201ENST00000479691 655 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC079080.1-201ENST00000479841 822 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 RPL7AP10-201ENST00000481016 791 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC099521.1-201ENST00000482557 334 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 LDHAP1-201ENST00000509421 992 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 SCARNA18.1-201ENST00000516330 83 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 IGKV3D-25-201ENST00000519599 235 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 TOMM20P1-201ENST00000534518 427 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 CYCSP38-201ENST00000559840 322 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC007346.2-201ENST00000564816 892 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AL136131.3-201ENST00000607600 188 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AL139099.4-201ENST00000614802 114 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC129778.1-202ENST00000623812 261 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AL591379.1-207ENST00000635982 261 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 LINC01963-201ENST00000562038 3148 ntBASIC5.2□□□□□ -1.58
TMEM53Q6P2H8 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms