Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A1P61619 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A1P61619 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
SEC61A1P61619 Z83820.1-201ENST00000456978 1499 ntBASIC5.2□□□□□ -1.58
SEC61A1P61619 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC009501.3-201ENST00000605001 1352 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A1P61619 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A1P61619 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A1P61619 RNA5SP187-201ENST00000384400 119 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A1P61619 RNU6-1000P-201ENST00000391066 106 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 MIR1282-201ENST00000408865 101 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 RNU6-584P-201ENST00000410350 95 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 RN7SKP144-201ENST00000411108 279 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 RPS3AP25-201ENST00000411660 793 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.19□□□□□ -1.58
SEC61A1P61619 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 MTCO1P45-201ENST00000431457 267 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 NPM1P18-201ENST00000434232 732 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.19□□□□□ -1.58
SEC61A1P61619 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC016908.1-201ENST00000442571 1219 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 MORF4-201ENST00000447135 971 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC090543.1-201ENST00000492168 485 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 TRAV31-201ENST00000502780 342 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AC093534.1-201ENST00000504977 132 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 Y_RNA.710-201ENST00000516975 110 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 RNU6-334P-201ENST00000517072 102 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 IGKV3D-25-201ENST00000519599 235 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC092865.1-201ENST00000544395 1023 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A1P61619 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC008147.3-201ENST00000548666 354 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AL049838.1-201ENST00000563647 981 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 AC008507.2-201ENST00000588402 1176 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AC010503.3-201ENST00000594355 540 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 HMGB1P51-201ENST00000605166 638 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AC112220.2-201ENST00000605513 533 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 AL121652.1-201ENST00000608851 448 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A1P61619 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 MIR1910-201ENST00000636955 80 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 TMEM30CP-203ENST00000637814 1035 ntBASIC5.19□□□□□ -1.58
SEC61A1P61619 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A1P61619 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A1P61619 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SEC61A1P61619 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A1P61619 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A1P61619 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A1P61619 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SEC61A1P61619 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A1P61619 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A1P61619 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.18□□□□□ -1.58
SEC61A1P61619 AC106754.1-201ENST00000562632 1513 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 AL354854.1-201ENST00000455940 1363 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A1P61619 MAPK10-338ENST00000641647 3362 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A1P61619 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.18□□□□□ -1.58
SEC61A1P61619 AC011416.1-201ENST00000514947 1732 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SEC61A1P61619 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.18□□□□□ -1.58
SEC61A1P61619 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SEC61A1P61619 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SEC61A1P61619 MIR365B-201ENST00000362317 111 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 RNU1-49P-201ENST00000363468 159 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 RN7SKP69-201ENST00000365390 305 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 RNU6-650P-201ENST00000365658 111 ntBASIC5.18□□□□□ -1.58
SEC61A1P61619 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SEC61A1P61619 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.18□□□□□ -1.58
SEC61A1P61619 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.18□□□□□ -1.58
SEC61A1P61619 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms