Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
NUP98P52948 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NUP98P52948 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.61□□□□□ -1.35
NUP98P52948 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NUP98P52948 AL353625.1-202ENST00000366273 571 ntBASIC6.61□□□□□ -1.35
NUP98P52948 RPA2P2-201ENST00000419698 796 ntBASIC6.61□□□□□ -1.35
NUP98P52948 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP98P52948 AC008072.1-201ENST00000434254 824 ntBASIC6.61□□□□□ -1.35
NUP98P52948 AC011753.3-201ENST00000443436 406 ntBASIC6.61□□□□□ -1.35
NUP98P52948 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP98P52948 RPS3AP53-201ENST00000454716 778 ntBASIC6.61□□□□□ -1.35
NUP98P52948 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP98P52948 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.61□□□□□ -1.35
NUP98P52948 EIF3FP1-201ENST00000613970 806 ntBASIC6.61□□□□□ -1.35
NUP98P52948 AC099494.2-201ENST00000623371 978 ntBASIC6.61□□□□□ -1.35
NUP98P52948 KYNUP3-201ENST00000574386 1341 ntBASIC6.61□□□□□ -1.35
NUP98P52948 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.61□□□□□ -1.35
NUP98P52948 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP98P52948 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP98P52948 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 HSPA8P14-201ENST00000552265 1805 ntBASIC6.6□□□□□ -1.35
NUP98P52948 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 LCOR-201ENST00000286067 4542 ntBASIC6.6□□□□□ -1.35
NUP98P52948 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 RNA5SP123-201ENST00000363244 119 ntBASIC6.6□□□□□ -1.35
NUP98P52948 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.6□□□□□ -1.35
NUP98P52948 AC009127.1-201ENST00000467090 155 ntBASIC6.6□□□□□ -1.35
NUP98P52948 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.6□□□□□ -1.35
NUP98P52948 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.6□□□□□ -1.35
NUP98P52948 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 AC009779.8-201ENST00000641684 4384 ntBASIC6.6□□□□□ -1.35
NUP98P52948 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NUP98P52948 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
NUP98P52948 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP98P52948 COX6B1P1-201ENST00000415962 213 ntBASIC6.6□□□□□ -1.35
NUP98P52948 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 AL590399.2-201ENST00000427536 309 ntBASIC6.6□□□□□ -1.35
NUP98P52948 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 snoU13.20-201ENST00000459180 104 ntBASIC6.6□□□□□ -1.35
NUP98P52948 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.6□□□□□ -1.35
NUP98P52948 AC008897.1-201ENST00000494006 347 ntBASIC6.6□□□□□ -1.35
NUP98P52948 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP98P52948 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
NUP98P52948 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NUP98P52948 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.59□□□□□ -1.35
NUP98P52948 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.59□□□□□ -1.35
NUP98P52948 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NUP98P52948 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NUP98P52948 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.59□□□□□ -1.35
NUP98P52948 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
NUP98P52948 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.59□□□□□ -1.35
NUP98P52948 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
NUP98P52948 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
NUP98P52948 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
NUP98P52948 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC6.59□□□□□ -1.35
NUP98P52948 MGAT2P2-201ENST00000427194 797 ntBASIC6.59□□□□□ -1.35
NUP98P52948 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC6.59□□□□□ -1.35
NUP98P52948 AC093414.1-201ENST00000434712 514 ntBASIC6.59□□□□□ -1.35
NUP98P52948 AL161722.2-201ENST00000434731 981 ntBASIC6.59□□□□□ -1.35
NUP98P52948 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.59□□□□□ -1.35
NUP98P52948 AC073072.2-201ENST00000447425 348 ntBASIC6.59□□□□□ -1.35
NUP98P52948 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.59□□□□□ -1.35
NUP98P52948 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.59□□□□□ -1.35
NUP98P52948 AC006427.1-201ENST00000514359 712 ntBASIC6.59□□□□□ -1.35
NUP98P52948 RN7SKP248-201ENST00000516278 305 ntBASIC6.59□□□□□ -1.35
NUP98P52948 AP001804.1-201ENST00000526868 919 ntBASIC6.59□□□□□ -1.35
NUP98P52948 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.59□□□□□ -1.35
NUP98P52948 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.59□□□□□ -1.35
NUP98P52948 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.59□□□□□ -1.35
NUP98P52948 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 146.3 ms