Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
SMARCA2P51531 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMARCA2P51531 AC022819.1-201ENST00000563495 3910 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
SMARCA2P51531 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC9.5□□□□□ -0.89
SMARCA2P51531 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC9.5□□□□□ -0.89
SMARCA2P51531 MIR1182-201ENST00000408363 97 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 NUTF2P7-201ENST00000453086 375 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 AC092754.1-201ENST00000472975 479 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 AC058823.1-201ENST00000485315 474 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 RPL23AP72-201ENST00000492447 435 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC9.5□□□□□ -0.89
SMARCA2P51531 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC9.5□□□□□ -0.89
SMARCA2P51531 AC034205.1-201ENST00000520621 638 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
SMARCA2P51531 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC9.5□□□□□ -0.89
SMARCA2P51531 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
SMARCA2P51531 MTCO1P1-201ENST00000624263 1081 ntBASIC9.5□□□□□ -0.89
SMARCA2P51531 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC9.5□□□□□ -0.89
SMARCA2P51531 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
SMARCA2P51531 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC9.49□□□□□ -0.89
SMARCA2P51531 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMARCA2P51531 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC9.49□□□□□ -0.89
SMARCA2P51531 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC9.49□□□□□ -0.89
SMARCA2P51531 RNA5SP428-201ENST00000365129 132 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC9.49□□□□□ -0.89
SMARCA2P51531 RIMKLBP2-201ENST00000424737 654 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 RPL18P10-201ENST00000425606 538 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 DNAJC19P7-201ENST00000428811 344 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC9.49□□□□□ -0.89
SMARCA2P51531 RPL5P25-201ENST00000441148 775 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC9.49□□□□□ -0.89
SMARCA2P51531 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC9.49□□□□□ -0.89
SMARCA2P51531 RPS23P7-201ENST00000466210 444 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 AL110118.1-201ENST00000553543 400 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC9.49□□□□□ -0.89
SMARCA2P51531 PDCD6IPP2-207ENST00000566321 1069 ntBASIC9.49□□□□□ -0.89
SMARCA2P51531 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC9.49□□□□□ -0.89
SMARCA2P51531 XIST-210ENST00000602863 775 ntTSL 3 BASIC9.49□□□□□ -0.89
SMARCA2P51531 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMARCA2P51531 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMARCA2P51531 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
SMARCA2P51531 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC9.49□□□□□ -0.89
SMARCA2P51531 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC9.49□□□□□ -0.89
SMARCA2P51531 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMARCA2P51531 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMARCA2P51531 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
SMARCA2P51531 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC9.48□□□□□ -0.89
SMARCA2P51531 AC005725.1-201ENST00000577346 2607 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 MAPK10-263ENST00000641052 4307 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC9.48□□□□□ -0.89
SMARCA2P51531 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
SMARCA2P51531 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SMARCA2P51531 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SMARCA2P51531 AP002530.1-201ENST00000405705 684 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 RN7SKP100-201ENST00000411258 284 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 RPL17P36-201ENST00000420302 549 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC9.48□□□□□ -0.89
SMARCA2P51531 CNOT7P1-201ENST00000429006 852 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC9.48□□□□□ -0.89
SMARCA2P51531 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
SMARCA2P51531 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC9.48□□□□□ -0.89
SMARCA2P51531 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
SMARCA2P51531 AC023818.1-201ENST00000498379 384 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 AC140172.1-201ENST00000502928 141 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC9.48□□□□□ -0.89
SMARCA2P51531 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC9.48□□□□□ -0.89
SMARCA2P51531 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC9.48□□□□□ -0.89
SMARCA2P51531 OR11H3P-201ENST00000554547 982 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC9.48□□□□□ -0.89
SMARCA2P51531 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC9.48□□□□□ -0.89
SMARCA2P51531 AC091042.1-201ENST00000579213 173 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 MIR3667-201ENST00000581025 74 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 AL391358.1-201ENST00000605342 190 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 AC135068.5-201ENST00000624197 983 ntBASIC9.48□□□□□ -0.89
SMARCA2P51531 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SMARCA2P51531 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
SMARCA2P51531 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
SMARCA2P51531 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9.48□□□□□ -0.89
SMARCA2P51531 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
SMARCA2P51531 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.47□□□□□ -0.89
SMARCA2P51531 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA2P51531 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA2P51531 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA2P51531 AC114774.1-201ENST00000507410 1770 ntBASIC9.47□□□□□ -0.89
SMARCA2P51531 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC9.47□□□□□ -0.89
SMARCA2P51531 RPL10P10-201ENST00000403509 664 ntBASIC9.47□□□□□ -0.89
SMARCA2P51531 AC093414.1-201ENST00000434712 514 ntBASIC9.47□□□□□ -0.89
SMARCA2P51531 RBMY2TP-201ENST00000451162 947 ntBASIC9.47□□□□□ -0.89
SMARCA2P51531 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC9.47□□□□□ -0.89
SMARCA2P51531 IGHVIII-47-1-201ENST00000518187 331 ntBASIC9.47□□□□□ -0.89
SMARCA2P51531 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA2P51531 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC9.47□□□□□ -0.89
SMARCA2P51531 RN7SL690P-201ENST00000582087 240 ntBASIC9.47□□□□□ -0.89
SMARCA2P51531 LPP-208ENST00000448637 5835 ntTSL 5 BASIC9.47□□□□□ -0.89
SMARCA2P51531 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC9.47□□□□□ -0.89
SMARCA2P51531 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA2P51531 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
SMARCA2P51531 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9.47□□□□□ -0.89
SMARCA2P51531 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms