Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NEAT1-202ENST00000501122 22743 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 QRSL1P1-201ENST00000400977 1540 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CXCL1P09341 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CXCL1P09341 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CXCL1P09341 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CXCL1P09341 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 RPSAP35-201ENST00000413753 818 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.18□□□□□ -1.74
CXCL1P09341 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 RPS26P4-201ENST00000431743 355 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.18□□□□□ -1.74
CXCL1P09341 PPIAP7-201ENST00000454070 489 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 RN7SL269P-201ENST00000467795 305 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 H3F3AP5-201ENST00000475267 429 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 RN7SL570P-201ENST00000484405 292 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 RPL15P21-201ENST00000495592 567 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 RFPL4AP5-201ENST00000514977 504 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 SCARNA20.4-201ENST00000516969 131 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 AP000620.1-201ENST00000527147 504 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC4.18□□□□□ -1.74
CXCL1P09341 MIR212-201ENST00000586026 110 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 OR7M1P-201ENST00000608946 533 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 OSTC-205ENST00000613215 876 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 AC090607.5-201ENST00000615692 224 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 MIR8069-1-201ENST00000616627 86 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 MIR8069-2-201ENST00000621412 86 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 AC089999.3-201ENST00000622440 577 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 TMEM30CP-203ENST00000637814 1035 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 OR11H2-202ENST00000641517 1085 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CXCL1P09341 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CXCL1P09341 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CXCL1P09341 LINC01109-201ENST00000603837 3081 ntBASIC4.18□□□□□ -1.74
CXCL1P09341 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL1P09341 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
CXCL1P09341 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL1P09341 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.17□□□□□ -1.74
CXCL1P09341 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 SNORA64.3-201ENST00000365647 134 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL1P09341 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 AL445213.1-201ENST00000412589 747 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL1P09341 CYCSP10-201ENST00000417973 294 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL1P09341 RPL7AP51-201ENST00000422016 760 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC046176.1-201ENST00000435260 1170 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL1P09341 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 ARMC4P1-201ENST00000438905 707 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 AC245291.3-201ENST00000443400 292 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CXCL1P09341 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.17□□□□□ -1.74
CXCL1P09341 AC108103.1-201ENST00000511286 446 ntBASIC4.17□□□□□ -1.74
CXCL1P09341 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms