Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 KPNA2P2-201ENST00000419546 1489 ntBASIC9.71□□□□□ -0.86
RTN4Q9NQC3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
RTN4Q9NQC3 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC016930.1-201ENST00000468766 2205 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RECQL-204ENST00000444129 3702 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RPS11-201ENST00000270625 614 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 TAS2R60-201ENST00000332690 957 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RNU1-130P-201ENST00000363930 160 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RNU6-483P-201ENST00000384088 108 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RNA5SP118-201ENST00000410385 109 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 HMGN1P34-201ENST00000413023 290 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 OR51A5P-201ENST00000415429 942 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RPL31P45-201ENST00000419532 356 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 PHKA1P1-201ENST00000420457 621 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC119618.1-201ENST00000434191 222 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 USP9YP8-201ENST00000441913 500 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 USP9YP15-201ENST00000442391 422 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AL353072.1-201ENST00000446021 442 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 TRAF3IP2-AS1-206ENST00000449449 784 ntTSL 3 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 MTCO2P29-201ENST00000465212 189 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RPL23AP64-201ENST00000469465 435 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC130651.1-201ENST00000482912 598 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 IGKV3D-31-201ENST00000519131 281 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 LINC00958-203ENST00000527945 1121 ntTSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 ARHGDIB-207ENST00000541644 911 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC068993.1-201ENST00000546724 589 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AL132639.1-201ENST00000553698 475 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC048337.1-201ENST00000557474 552 ntTSL 4 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC080112.1-201ENST00000583752 487 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC006116.6-201ENST00000593258 1103 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 RPS11-202ENST00000594493 575 ntTSL 3 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC019257.2-201ENST00000605539 497 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC087623.4-201ENST00000606593 695 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AC079395.2-201ENST00000610982 737 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 MIR6749-201ENST00000617008 69 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 MIR6760-201ENST00000617342 68 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 AL139220.2-209ENST00000626342 826 ntTSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 BCAS3-233ENST00000626960 227 ntTSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 LINC01835-203ENST00000639800 567 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 SEPT4-211ENST00000579371 1362 ntTSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 PWRN1-212ENST00000569908 1435 ntBASIC9.7□□□□□ -0.86
RTN4Q9NQC3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
RTN4Q9NQC3 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 GPI-202ENST00000415930 4000 ntTSL 2 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNU6-1243P-201ENST00000364028 107 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNU1-28P-201ENST00000383861 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNU1-27P-201ENST00000383869 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNU1-1-201ENST00000383925 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 Y_RNA.409-201ENST00000383990 98 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNVU1-18-201ENST00000384010 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNU1-2-201ENST00000384278 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNU1-4-201ENST00000384659 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RNU1-3-201ENST00000384782 164 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 LDHAP4-201ENST00000397561 998 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 BTBD10P2-201ENST00000404779 676 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RN7SKP251-201ENST00000410830 314 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC9.69□□□□□ -0.86
RTN4Q9NQC3 NUP35P2-201ENST00000416748 943 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RBMY2GP-201ENST00000418671 1034 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 PRDX3P1-201ENST00000418695 763 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RPS15AP30-201ENST00000420976 390 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AL355863.1-201ENST00000424331 293 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 RBMY2NP-201ENST00000434454 1028 ntBASIC9.69□□□□□ -0.86
RTN4Q9NQC3 AL358976.1-201ENST00000437555 392 ntBASIC9.69□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms