Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR585-201ENST00000384887 94 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AL929472.1-201ENST00000417484 429 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 ZNF90P2-204ENST00000419323 1075 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 OR1AA1P-201ENST00000419597 916 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 VDAC1P2-201ENST00000423609 850 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 VDAC1P6-201ENST00000430062 855 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 FUNDC2P2-202ENST00000443452 493 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 RBMY3AP-201ENST00000449381 1145 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 RPL39P36-201ENST00000490784 156 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC022447.3-201ENST00000506865 495 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC109445.1-201ENST00000512356 383 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 SNORA74.1-201ENST00000516320 180 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 snoZ278.1-201ENST00000517059 112 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC007424.1-203ENST00000554613 687 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 EEF1B2P1-201ENST00000567221 672 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 MIR3912-201ENST00000577566 105 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 MIR3913-1-201ENST00000577744 102 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC008736.1-201ENST00000592431 568 ntTSL 2 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC009955.2-201ENST00000597288 542 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC012175.1-201ENST00000603755 531 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC002094.4-201ENST00000613598 307 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC015908.5-201ENST00000623289 343 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 CD302-204ENST00000553424 3866 ntTSL 2 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 SMARCA1-202ENST00000371122 4099 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 SHQ1P1-201ENST00000437111 1544 ntBASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.4□□□□□ -1.22
COL25A1Q9BXS0 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 AP003716.1-202ENST00000511677 3387 ntTSL 2 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 KIF23-201ENST00000260363 3713 ntAPPRIS P4 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 GPBP1-203ENST00000424459 4683 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
COL25A1Q9BXS0 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 TMEM106A-208ENST00000612339 3266 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AZIN1-202ENST00000347770 2857 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 SLC8A1-206ENST00000406391 2814 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC009053.1-202ENST00000563377 2051 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 MSL3P1-201ENST00000438684 2032 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 TMX2-202ENST00000378312 1521 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 RN7SKP115-201ENST00000363177 317 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 Y_RNA.296-201ENST00000364930 108 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 Z97832.1-201ENST00000402490 328 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 AL022238.1-201ENST00000442557 355 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 HSPE1P28-201ENST00000443139 211 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 RPL5P7-201ENST00000444235 813 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 RPL7AP71-201ENST00000451120 739 ntBASIC7.39□□□□□ -1.23
COL25A1Q9BXS0 SNRPGP6-201ENST00000451124 220 ntBASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms