Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC073610.1-201ENST00000489971 396 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 RN7SKP35-201ENST00000517210 151 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC021678.3-201ENST00000517893 476 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AL845552.1-201ENST00000556820 323 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 FAM72A-208ENST00000607379 1139 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AC008833.1-201ENST00000611633 691 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 AL390318.1-201ENST00000624564 687 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CPNE2Q96FN4 LYARP1-201ENST00000436977 1501 ntBASIC4.82□□□□□ -1.64
CPNE2Q96FN4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 TMSB4XP2-201ENST00000335179 210 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RNFT1P3-201ENST00000340898 1052 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RNU6-249P-201ENST00000363016 102 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RNA5SP30-201ENST00000365552 115 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AL009179.1-201ENST00000406085 265 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RPS6P23-201ENST00000413224 722 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AL596266.1-201ENST00000448132 400 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RPS3AP15-201ENST00000483874 781 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AC023424.1-201ENST00000496058 459 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RBBP4P1-201ENST00000502424 1276 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 NENFP3-201ENST00000503735 313 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AC018797.1-201ENST00000510791 255 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RN7SKP253-201ENST00000516424 309 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 RNA5SP230-201ENST00000517039 122 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 IGKV3D-25-201ENST00000519599 235 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AC111152.1-202ENST00000635848 339 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AC099654.6-201ENST00000636487 512 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CPNE2Q96FN4 AC104623.2-202ENST00000623477 4002 ntBASIC4.81□□□□□ -1.64
CPNE2Q96FN4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 SMG1P7-201ENST00000565246 2704 ntBASIC4.8□□□□□ -1.64
CPNE2Q96FN4 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 PWAR1-201ENST00000624188 2414 ntBASIC4.8□□□□□ -1.64
CPNE2Q96FN4 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 RNA5SP326-201ENST00000363209 110 ntBASIC4.8□□□□□ -1.64
CPNE2Q96FN4 RNA5SP232-201ENST00000364144 119 ntBASIC4.8□□□□□ -1.64
CPNE2Q96FN4 CBX1P3-201ENST00000413296 527 ntBASIC4.8□□□□□ -1.64
CPNE2Q96FN4 MRPL53P1-201ENST00000414323 319 ntBASIC4.8□□□□□ -1.64
CPNE2Q96FN4 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.8□□□□□ -1.64
CPNE2Q96FN4 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms