Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AL049779.3-201ENST00000557141 606 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.59□□□□□ -1.35
HPS3Q969F9 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HPS3Q969F9 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.59□□□□□ -1.35
HPS3Q969F9 AC067838.1-201ENST00000606064 577 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 AP000864.1-201ENST00000609424 650 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 AC092266.1-201ENST00000610958 165 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 MIR6809-201ENST00000612189 116 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 AC091046.2-201ENST00000620775 665 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 FRG1DP-201ENST00000635586 771 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 TMEM30CP-203ENST00000637814 1035 ntBASIC6.59□□□□□ -1.35
HPS3Q969F9 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.59□□□□□ -1.35
HPS3Q969F9 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.59□□□□□ -1.35
HPS3Q969F9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
HPS3Q969F9 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.59□□□□□ -1.35
HPS3Q969F9 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.36
HPS3Q969F9 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
HPS3Q969F9 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
HPS3Q969F9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.36
HPS3Q969F9 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.58□□□□□ -1.36
HPS3Q969F9 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.58□□□□□ -1.36
HPS3Q969F9 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HPS3Q969F9 RNA5SP211-201ENST00000365516 117 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HPS3Q969F9 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HPS3Q969F9 NPM1P37-201ENST00000403105 874 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 LSM5-206ENST00000409987 504 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 MYL6P5-201ENST00000412707 459 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 NIFKP3-201ENST00000417799 865 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.58□□□□□ -1.36
HPS3Q969F9 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC007679.3-201ENST00000434035 414 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.58□□□□□ -1.36
HPS3Q969F9 RPS10P18-201ENST00000442662 495 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 RNFT1P2-201ENST00000443064 757 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 RPL6P30-201ENST00000443382 862 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.58□□□□□ -1.36
HPS3Q969F9 RPL32P14-201ENST00000463196 378 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AC098847.1-201ENST00000473094 348 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AC083795.1-201ENST00000491760 320 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 MTCO3P27-201ENST00000514397 196 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AP003355.1-201ENST00000518956 587 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.58□□□□□ -1.36
HPS3Q969F9 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.58□□□□□ -1.36
HPS3Q969F9 IGLV3-30-201ENST00000524362 298 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AL845552.1-201ENST00000556820 323 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.58□□□□□ -1.36
HPS3Q969F9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HPS3Q969F9 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AL499605.1-201ENST00000604628 403 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AC090912.3-201ENST00000609775 533 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 AC008759.3-201ENST00000613300 508 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC6.58□□□□□ -1.36
HPS3Q969F9 OR11H2-202ENST00000641517 1085 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC132825.1-201ENST00000463573 2247 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HPS3Q969F9 TMEM161BP1-201ENST00000457388 1457 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
HPS3Q969F9 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
HPS3Q969F9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HPS3Q969F9 AC093225.1-201ENST00000506867 1408 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
HPS3Q969F9 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
HPS3Q969F9 HSPD1P9-201ENST00000420325 1636 ntBASIC6.58□□□□□ -1.36
HPS3Q969F9 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.57□□□□□ -1.36
HPS3Q969F9 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HPS3Q969F9 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
HPS3Q969F9 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
HPS3Q969F9 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.57□□□□□ -1.36
HPS3Q969F9 GNL2P1-201ENST00000451274 2190 ntBASIC6.57□□□□□ -1.36
HPS3Q969F9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
HPS3Q969F9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
HPS3Q969F9 SELENOWP1-201ENST00000322792 252 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms