Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AL022721.1-201ENST00000436521 505 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 HCG20-208ENST00000439406 1202 ntTSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC005002.1-201ENST00000447458 540 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 MRPS31P2-201ENST00000451581 518 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 MED28P7-201ENST00000456611 530 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 PA2G4P4-201ENST00000473864 1182 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC078785.3-201ENST00000476607 425 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 RN7SL869P-201ENST00000497032 300 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 NTAN1P2-201ENST00000515730 940 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC011726.3-201ENST00000518031 568 ntTSL 4 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC023157.2-201ENST00000540596 141 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 POLR2KP1-201ENST00000553226 168 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 OR4T1P-201ENST00000554933 911 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 OR7A18P-201ENST00000600416 277 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC115286.1-201ENST00000604298 434 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC103710.4-201ENST00000609301 899 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 TP53BP1-201ENST00000263801 6346 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 MMP13-202ENST00000340273 1470 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC093775.1-201ENST00000624154 1868 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 CD180-201ENST00000256447 5388 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 ADGRE1-204ENST00000381407 2687 ntTSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 GM2A-201ENST00000357164 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AC020549.1-201ENST00000536916 1440 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 PUS3-201ENST00000227474 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 USP44-208ENST00000552440 1818 ntTSL 5 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 CALML4-203ENST00000395465 4155 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 AL133279.3-201ENST00000563140 2352 ntBASIC8.61□□□□□ -1.03
VARS2Q5ST30 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
VARS2Q5ST30 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 PIEZO2-203ENST00000503781 8259 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VARS2Q5ST30 LRRC66-201ENST00000343457 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 STRADA-233ENST00000638888 1718 ntTSL 5 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 NLRP9P1-201ENST00000540920 2655 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 ANAPC1-201ENST00000341068 8262 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 CLK1-201ENST00000321356 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AL079307.1-201ENST00000553312 5982 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC048380.2-201ENST00000624725 3548 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 RN7SKP95-201ENST00000362860 303 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 RNA5SP149-201ENST00000364952 92 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 Y_RNA.364-201ENST00000365532 101 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 Y_RNA.785-201ENST00000384290 109 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 RNU6-809P-201ENST00000384461 107 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 RNU6-1158P-201ENST00000391167 107 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AL359634.1-202ENST00000404721 284 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 GAPDHP42-201ENST00000406848 981 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC130472.1-201ENST00000427885 309 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 PYHIN5P-201ENST00000431627 723 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC098831.1-201ENST00000440661 216 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 OR51P1P-201ENST00000447547 942 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 NPM1P39-201ENST00000449818 867 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 RPS20P21-201ENST00000466859 343 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC116353.1-201ENST00000489727 316 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 DYNLL1P6-201ENST00000503440 264 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC114546.2-201ENST00000560683 477 ntTSL 3 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 PRR13P4-201ENST00000577786 421 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC090287.1-201ENST00000578374 291 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 HMGN1P30-201ENST00000589286 268 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC245389.1-201ENST00000605141 529 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC078899.5-201ENST00000612475 178 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 AP001442.1-201ENST00000617755 659 ntTSL 5 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 MIR6761-201ENST00000617899 72 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 PPP3CB-AS1-214ENST00000620432 654 ntTSL 5 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AC005355.2-201ENST00000625064 484 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 OR4G1P-203ENST00000641984 1631 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
VARS2Q5ST30 AL158206.1-201ENST00000563205 1965 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 STK32B-204ENST00000510398 3241 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VARS2Q5ST30 PWAR5-201ENST00000624480 3180 ntBASIC8.6□□□□□ -1.03
VARS2Q5ST30 TMEM45A-201ENST00000323523 1567 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms