Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.91□□□□□ -1.46
LHX1P48742 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 CIR1P2-201ENST00000514821 1342 ntBASIC5.91□□□□□ -1.46
LHX1P48742 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LHX1P48742 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.91□□□□□ -1.46
LHX1P48742 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.91□□□□□ -1.46
LHX1P48742 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.91□□□□□ -1.46
LHX1P48742 AP000432.2-201ENST00000624164 2048 ntBASIC5.91□□□□□ -1.46
LHX1P48742 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LHX1P48742 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LHX1P48742 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LHX1P48742 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.9□□□□□ -1.46
LHX1P48742 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
LHX1P48742 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.9□□□□□ -1.46
LHX1P48742 RN7SKP162-201ENST00000363605 345 ntBASIC5.9□□□□□ -1.46
LHX1P48742 RNA5SP234-201ENST00000363916 119 ntBASIC5.9□□□□□ -1.46
LHX1P48742 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.9□□□□□ -1.46
LHX1P48742 NPM1P4-201ENST00000414095 812 ntBASIC5.9□□□□□ -1.46
LHX1P48742 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC5.9□□□□□ -1.46
LHX1P48742 AC092106.1-201ENST00000444291 373 ntBASIC5.9□□□□□ -1.46
LHX1P48742 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.9□□□□□ -1.46
LHX1P48742 MORF4L2P1-201ENST00000503761 858 ntBASIC5.9□□□□□ -1.46
LHX1P48742 AC147055.1-201ENST00000509261 750 ntBASIC5.9□□□□□ -1.46
LHX1P48742 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 CCNHP1-201ENST00000513311 678 ntBASIC5.9□□□□□ -1.46
LHX1P48742 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.9□□□□□ -1.46
LHX1P48742 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.9□□□□□ -1.46
LHX1P48742 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.9□□□□□ -1.46
LHX1P48742 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 AC078878.1-201ENST00000539832 958 ntBASIC5.9□□□□□ -1.46
LHX1P48742 AC084824.2-201ENST00000548906 345 ntBASIC5.9□□□□□ -1.46
LHX1P48742 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.9□□□□□ -1.46
LHX1P48742 SUGT1P3-202ENST00000604259 383 ntBASIC5.9□□□□□ -1.46
LHX1P48742 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.9□□□□□ -1.46
LHX1P48742 AL352984.2-202ENST00000613699 155 ntBASIC5.9□□□□□ -1.46
LHX1P48742 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.9□□□□□ -1.46
LHX1P48742 SAMMSON-209ENST00000641222 1100 ntBASIC5.9□□□□□ -1.46
LHX1P48742 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
LHX1P48742 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.47
LHX1P48742 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
LHX1P48742 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.9□□□□□ -1.47
LHX1P48742 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LHX1P48742 AL359955.1-201ENST00000455242 3275 ntBASIC5.9□□□□□ -1.47
LHX1P48742 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LHX1P48742 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
LHX1P48742 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LHX1P48742 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LHX1P48742 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.89□□□□□ -1.47
LHX1P48742 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LHX1P48742 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 AC009804.1-201ENST00000400949 179 ntBASIC5.89□□□□□ -1.47
LHX1P48742 RIMKLBP2-201ENST00000424737 654 ntBASIC5.89□□□□□ -1.47
LHX1P48742 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.89□□□□□ -1.47
LHX1P48742 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.89□□□□□ -1.47
LHX1P48742 RPL7P45-201ENST00000455851 743 ntBASIC5.89□□□□□ -1.47
LHX1P48742 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 OR52A4P-203ENST00000498233 1014 ntBASIC5.89□□□□□ -1.47
LHX1P48742 RPS17P5-201ENST00000498293 408 ntBASIC5.89□□□□□ -1.47
LHX1P48742 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 SCARNA21.2-201ENST00000516600 166 ntBASIC5.89□□□□□ -1.47
LHX1P48742 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.89□□□□□ -1.47
LHX1P48742 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.89□□□□□ -1.47
LHX1P48742 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LHX1P48742 AC130364.2-201ENST00000528639 604 ntBASIC5.89□□□□□ -1.47
LHX1P48742 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.89□□□□□ -1.47
LHX1P48742 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.89□□□□□ -1.47
LHX1P48742 AC122688.1-201ENST00000541494 223 ntBASIC5.89□□□□□ -1.47
LHX1P48742 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.89□□□□□ -1.47
LHX1P48742 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.89□□□□□ -1.47
LHX1P48742 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LHX1P48742 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.89□□□□□ -1.47
LHX1P48742 AC096586.2-201ENST00000610260 441 ntBASIC5.89□□□□□ -1.47
LHX1P48742 MIR6826-201ENST00000617808 98 ntBASIC5.89□□□□□ -1.47
LHX1P48742 AC005840.5-201ENST00000619166 599 ntBASIC5.89□□□□□ -1.47
LHX1P48742 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LHX1P48742 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
LHX1P48742 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms