Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 AC007342.5-201ENST00000571340 2142 ntBASIC6.16□□□□□ -1.42
USP8P40818 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 AC107977.1-201ENST00000355745 939 ntBASIC6.16□□□□□ -1.42
USP8P40818 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USP8P40818 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.16□□□□□ -1.42
USP8P40818 RN7SKP279-201ENST00000411383 298 ntBASIC6.16□□□□□ -1.42
USP8P40818 AC006455.6-201ENST00000426192 893 ntBASIC6.16□□□□□ -1.42
USP8P40818 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.16□□□□□ -1.42
USP8P40818 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.16□□□□□ -1.42
USP8P40818 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.16□□□□□ -1.42
USP8P40818 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 RPS23P2-201ENST00000463671 415 ntBASIC6.16□□□□□ -1.42
USP8P40818 RPL5P16-201ENST00000471467 790 ntBASIC6.16□□□□□ -1.42
USP8P40818 RPL32P33-201ENST00000487023 394 ntBASIC6.16□□□□□ -1.42
USP8P40818 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.16□□□□□ -1.42
USP8P40818 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.16□□□□□ -1.42
USP8P40818 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.16□□□□□ -1.42
USP8P40818 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC6.16□□□□□ -1.42
USP8P40818 AC006499.4-201ENST00000510947 694 ntBASIC6.16□□□□□ -1.42
USP8P40818 SCARNA6.1-201ENST00000516989 238 ntBASIC6.16□□□□□ -1.42
USP8P40818 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.16□□□□□ -1.42
USP8P40818 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.16□□□□□ -1.42
USP8P40818 AC107993.1-201ENST00000591343 684 ntBASIC6.16□□□□□ -1.42
USP8P40818 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.16□□□□□ -1.42
USP8P40818 AL035661.1-201ENST00000620459 1144 ntBASIC6.16□□□□□ -1.42
USP8P40818 AC024884.1-201ENST00000620583 399 ntBASIC6.16□□□□□ -1.42
USP8P40818 AC129778.1-202ENST00000623812 261 ntBASIC6.16□□□□□ -1.42
USP8P40818 AL591379.1-207ENST00000635982 261 ntBASIC6.16□□□□□ -1.42
USP8P40818 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.16□□□□□ -1.42
USP8P40818 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
USP8P40818 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.16□□□□□ -1.42
USP8P40818 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 NEPNP-201ENST00000404786 1371 ntBASIC6.16□□□□□ -1.42
USP8P40818 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
USP8P40818 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
USP8P40818 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.15□□□□□ -1.42
USP8P40818 AC144833.1-201ENST00000567953 4089 ntBASIC6.15□□□□□ -1.42
USP8P40818 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 AL138820.1-201ENST00000617901 5305 ntBASIC6.15□□□□□ -1.42
USP8P40818 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
USP8P40818 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
USP8P40818 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.42
USP8P40818 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
USP8P40818 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP8P40818 RNA5SP500-201ENST00000364486 119 ntBASIC6.15□□□□□ -1.42
USP8P40818 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
USP8P40818 AC087752.1-201ENST00000391360 558 ntBASIC6.15□□□□□ -1.42
USP8P40818 AC099535.1-201ENST00000408928 371 ntBASIC6.15□□□□□ -1.42
USP8P40818 NIFKP3-201ENST00000417799 865 ntBASIC6.15□□□□□ -1.42
USP8P40818 AC066692.1-201ENST00000421721 457 ntBASIC6.15□□□□□ -1.42
USP8P40818 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.15□□□□□ -1.42
USP8P40818 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.15□□□□□ -1.42
USP8P40818 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.15□□□□□ -1.42
USP8P40818 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.15□□□□□ -1.42
USP8P40818 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.15□□□□□ -1.42
USP8P40818 HLA-DPA3-207ENST00000454398 229 ntBASIC6.15□□□□□ -1.42
USP8P40818 RPS7P6-201ENST00000485777 579 ntBASIC6.15□□□□□ -1.42
USP8P40818 RPSAP51-201ENST00000497462 645 ntBASIC6.15□□□□□ -1.42
USP8P40818 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC6.15□□□□□ -1.42
USP8P40818 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.15□□□□□ -1.42
USP8P40818 AC021146.10-201ENST00000515628 706 ntBASIC6.15□□□□□ -1.42
USP8P40818 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 RNU6-964P-201ENST00000516524 69 ntBASIC6.15□□□□□ -1.42
USP8P40818 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.15□□□□□ -1.42
USP8P40818 HMGN2P36-201ENST00000529541 409 ntBASIC6.15□□□□□ -1.42
USP8P40818 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.15□□□□□ -1.42
USP8P40818 AC084824.2-201ENST00000548906 345 ntBASIC6.15□□□□□ -1.42
USP8P40818 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 AC096996.1-201ENST00000563813 325 ntBASIC6.15□□□□□ -1.42
USP8P40818 AC092121.1-201ENST00000569452 202 ntBASIC6.15□□□□□ -1.42
USP8P40818 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.15□□□□□ -1.42
USP8P40818 MIR4271-201ENST00000582451 67 ntBASIC6.15□□□□□ -1.42
USP8P40818 AP005262.1-201ENST00000582646 997 ntBASIC6.15□□□□□ -1.42
USP8P40818 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
USP8P40818 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC6.15□□□□□ -1.42
USP8P40818 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP8P40818 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP8P40818 WAC-209ENST00000428935 1320 ntTSL 2 BASIC6.15□□□□□ -1.43
USP8P40818 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP8P40818 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
USP8P40818 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.43
USP8P40818 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.15□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms