Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 RNU6-236P-201ENST00000363886 106 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AL021407.1-201ENST00000404531 386 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 RPS26P13-201ENST00000419030 330 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 SLC9B1P4-201ENST00000421957 1288 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 DSTNP5-201ENST00000427921 523 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 RPL12P16-201ENST00000431098 498 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 EMC3-AS1-205ENST00000438698 534 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AL589880.1-201ENST00000448271 287 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 CCNB1IP1P3-201ENST00000454702 829 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 RPL5P13-201ENST00000462840 709 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 RPL7P41-201ENST00000485823 957 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 RN7SL214P-201ENST00000487317 265 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC138409.2-202ENST00000507274 458 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC034244.1-201ENST00000507687 207 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC095052.1-201ENST00000509955 863 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 MAL2-205ENST00000521048 575 ntTSL 4 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 TRIM77BP-201ENST00000524985 1119 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AP004247.1-201ENST00000531556 1289 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC011611.5-201ENST00000552477 578 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 MRPS21P8-201ENST00000569196 235 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 MIR3614-201ENST00000581261 86 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 VN1R88P-201ENST00000596787 292 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC018692.2-201ENST00000624130 348 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 DDX18P5-201ENST00000534547 1306 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AL359396.1-201ENST00000623151 2376 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 NEPNP-201ENST00000404786 1371 ntBASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
CSB-PGBD3P0DP91 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF849P-201ENST00000594711 1566 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC007406.5-201ENST00000570140 3170 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 YES1P1-201ENST00000418510 1628 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 RNA5SP510-201ENST00000364697 99 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 RPL7L1P3-201ENST00000455249 689 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC006499.4-201ENST00000510947 694 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 SCARNA21.2-201ENST00000516600 166 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 MTND4LP26-201ENST00000518144 282 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC073648.5-201ENST00000603502 305 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 AC124312.4-201ENST00000605533 310 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 TUG1_1.1-201ENST00000610654 145 ntBASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
CSB-PGBD3P0DP91 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms