Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 HMGN2P36-201ENST00000529541 409 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 PCNAP4-201ENST00000532690 730 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 AC006530.1-201ENST00000555980 571 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.93□□□□□ -1.62
UBCP0CG48 AL356801.1-201ENST00000559320 294 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBCP0CG48 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.93□□□□□ -1.62
UBCP0CG48 AC234775.3-201ENST00000564612 656 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBCP0CG48 CCDC58P1-201ENST00000578567 430 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 H3F3BP2-201ENST00000583907 357 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.93□□□□□ -1.62
UBCP0CG48 AC005828.7-201ENST00000607331 556 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 AL356608.1-201ENST00000610034 820 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 MIR6721-201ENST00000617181 87 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 AC074140.1-201ENST00000621617 208 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.93□□□□□ -1.62
UBCP0CG48 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.93□□□□□ -1.62
UBCP0CG48 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBCP0CG48 TCP1P3-201ENST00000414406 1498 ntBASIC4.93□□□□□ -1.62
UBCP0CG48 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBCP0CG48 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
UBCP0CG48 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
UBCP0CG48 TTC39DP-201ENST00000416781 1688 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 AC097461.1-201ENST00000568928 2821 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 SMG1P7-201ENST00000565246 2704 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 RNFT1P3-201ENST00000340898 1052 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 MORN2-202ENST00000409077 465 ntTSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.92□□□□□ -1.62
UBCP0CG48 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 VN1R110P-201ENST00000438988 971 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 ATP5LP2-201ENST00000440646 311 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AC073465.2-201ENST00000440938 498 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 OR52Y1P-201ENST00000452418 828 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 AC098818.1-201ENST00000478593 252 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AC073610.1-201ENST00000489971 396 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 ENPP7P11-201ENST00000505915 627 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.92□□□□□ -1.62
UBCP0CG48 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.92□□□□□ -1.62
UBCP0CG48 OR5AM1P-201ENST00000532136 1032 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.92□□□□□ -1.62
UBCP0CG48 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 MIR4502-201ENST00000580432 81 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 MIR4311-201ENST00000580794 100 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 MIR4472-2-201ENST00000582069 67 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AC005479.3-201ENST00000602790 431 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AC124916.2-201ENST00000604416 224 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 FAM27E4-201ENST00000605259 342 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.92□□□□□ -1.62
UBCP0CG48 AC111152.1-202ENST00000635848 339 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 CASC19-274ENST00000642018 970 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
UBCP0CG48 SAMMSON-213ENST00000641336 1521 ntBASIC4.92□□□□□ -1.62
UBCP0CG48 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
UBCP0CG48 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
UBCP0CG48 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
UBCP0CG48 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UBCP0CG48 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.91□□□□□ -1.62
UBCP0CG48 AC093591.2-201ENST00000565254 3843 ntBASIC4.91□□□□□ -1.62
UBCP0CG48 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UBCP0CG48 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
UBCP0CG48 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
UBCP0CG48 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.91□□□□□ -1.62
UBCP0CG48 MIPEPP2-201ENST00000422560 1819 ntBASIC4.91□□□□□ -1.62
UBCP0CG48 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.91□□□□□ -1.62
UBCP0CG48 AC011755.1-201ENST00000623763 2049 ntBASIC4.91□□□□□ -1.62
UBCP0CG48 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UBCP0CG48 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
UBCP0CG48 RN7SKP74-201ENST00000362849 309 ntBASIC4.91□□□□□ -1.62
UBCP0CG48 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.91□□□□□ -1.62
UBCP0CG48 GAPDHP48-201ENST00000436626 961 ntBASIC4.91□□□□□ -1.62
UBCP0CG48 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms